Tunturiibacter psychrotolerans: RBB77_18075
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Entry
RBB77_18075 CDS
T10213
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tpsc Tunturiibacter psychrotolerans
Pathway
tpsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBB77_18075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_18075
Enzymes [BR:
tpsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RBB77_18075
DNA repair and recombination proteins [BR:
tpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBB77_18075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF421
HEAT_Maestro_2
Motif
Other DBs
NCBI-ProteinID:
XCB35588
UniProt:
A0AAU7ZXD0
LinkDB
All DBs
Position
complement(4351638..4352147)
Genome browser
AA seq
169 aa
AA seq
DB search
MNAAKPKVSIMMIGEQPGDREDKEGRPFVGPAGQLLDQCLEEAGIDRRDVYVTNTVKHFK
WEPRGKLRIHKKPNMKEIHACRPWLEAELETVKPTLIVCLGAVASHSLLGSNLKITKVHG
KVQQVEGLPPIIATLHPSAILRAHTDEDRHRQRHTLIDDLSRAAKFLSQ
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
ctgaacgcagcaaaaccgaaggtctcgatcatgatgatcggcgagcagcctggagaccgt
gaggataaggaaggccgcccttttgtcggaccagccggacagcttctcgatcaatgcttg
gaagaagctgggatcgatcgacgcgacgtctatgtcacgaatacggtgaagcacttcaaa
tgggagccgcgtggcaaactacgaatccataagaaaccaaacatgaaagagattcatgcc
tgtcgaccttggttggaggcagagttagagaccgtgaaaccgacgctaattgtatgtttg
ggcgcggtcgcctcacactccctcttgggttcgaacctgaagatcacgaaggttcatggc
aaagtccagcaggtcgaagggcttccacctatcatcgcgaccctgcacccgtccgcaatt
ctccgggctcacacagacgaagaccgtcatcgccagagacacacattgatagatgattta
tcgagagccgcaaaatttttatcgcaatag
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