Tunturiibacter psychrotolerans: RBB77_18155
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Entry
RBB77_18155 CDS
T10213
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpsc Tunturiibacter psychrotolerans
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpsc03032
]
RBB77_18155
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_18155
Enzymes [BR:
tpsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RBB77_18155
DNA replication proteins [BR:
tpsc03032
]
Prokaryotic type
DNA Topoisomerases
RBB77_18155
DNA repair and recombination proteins [BR:
tpsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBB77_18155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XCB32345
UniProt:
A0AAU7ZNA2
LinkDB
All DBs
Position
4373632..4374708
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AA seq
358 aa
AA seq
DB search
MAKTMPHLEIVTDPVESAKSAGLRYVSDAKPGITRKRWRKGFRYFDAEGAQVRELETLAR
IKSLVIPPAWTDVWICTNPKGHLQATGRDARGRKQSRYHPRWREVRDETKYERMMAFGVA
LPTIRDRVEQDLARPALPREKILAAIVRLMETTLIRVGNIEYAKQNQSYGLTTMRGKHVR
VDGSTITFKFQGKSGVRHAVDITDRRLAKIIQRCQDIPGYELFQYVDSEGEHHTIDSADV
NDYLREATGQYFTAKDFRTWTGTVMACAKLQEFDVFESESEAKKNVVEIVKTVAARLGNT
PSVCRKCYIHPLVIEAYMSGAFTKTRREQQSQESPRELQWEETVLMKLMQRVLKVAAA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttggccaagacaatgccgcacttagagatcgtcaccgacccagttgaatcggcgaaaagc
gcaggtctgcgctatgtttccgacgctaagcccgggatcacgcgcaagcgatggaggaaa
gggtttcgctacttcgacgcggagggagcgcaagtacgcgagttagagactctcgctcgt
atcaagtcattggtcatacctcccgcttggactgatgtgtggatttgtactaacccgaag
ggacatttgcaggctaccggacgagatgccagggggcggaagcagagccgatatcacccg
cgctggcgcgaggtacgggatgagaccaagtacgaacgcatgatggcttttggggtagcc
ctcccgacgattcgcgaccgcgtcgaacaggaccttgctagaccggctcttccacgagag
aaaatcctggcagcaatcgtgcgtctgatggaaaccaccctgattcgggtcgggaatatc
gagtatgcaaaacaaaaccaatcctatggattgactacgatgcggggcaaacatgtccga
gtcgacggatccactatcaccttcaaatttcagggaaagagcggcgtgcgacatgcggtg
gatatcactgatcgacggctggcgaagatcattcagcgctgccaagatatccccggttac
gaattgtttcagtatgtcgacagcgaaggggagcatcacacaatcgattctgccgacgtc
aacgactacctccgcgaggcgacggggcaatacttcactgccaaagacttccgaacttgg
acgggtacggttatggcctgcgcgaagttgcaggaattcgatgtgtttgagtcggagagc
gaagcgaagaagaatgtggtggagatcgtcaaaactgtggcggcgaggctaggaaataca
ccttctgtttgtcggaagtgctacatccaccccctagtgatcgaagcctacatgagtggt
gcgtttaccaaaacaaggagagagcagcaatcccaggagtctccaagagagcttcaatgg
gaggaaactgttttgatgaaactcatgcagcgtgtactcaaagttgccgcagcctag
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