Tunturiibacter psychrotolerans: RBB77_19700
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Entry
RBB77_19700 CDS
T10213
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tpsc Tunturiibacter psychrotolerans
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpsc03032
]
RBB77_19700
03036 Chromosome and associated proteins [BR:
tpsc03036
]
RBB77_19700
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_19700
DNA replication proteins [BR:
tpsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RBB77_19700
Chromosome and associated proteins [BR:
tpsc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RBB77_19700
DNA repair and recombination proteins [BR:
tpsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RBB77_19700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Urease_beta
TraI_2
Motif
Other DBs
NCBI-ProteinID:
XCB32631
UniProt:
A0AAU7ZNY1
LinkDB
All DBs
Position
4747342..4747611
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AA seq
89 aa
AA seq
DB search
MIKQDLIQRVVERTGLPRTKAESAVDAIFESMKATLIAGDRIELRGFGVFTVKPRKTGIG
RNPRTGAEVTIAPGKAVRFKPGKELHLLD
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaggatctcatacagagggtggtggaaagaaccggccttcccaggacaaaa
gcagagtcagctgtcgatgcgatctttgaaagcatgaaggcgactcttatcgcgggcgac
cgcattgaactccgcggatttggtgtatttaccgtcaagccgcgcaaaaccggaatcggt
cgcaatccgcggaccggagccgaagtcaccattgccccaggcaaggcagttcgcttcaag
cccggcaaagagttgcacctgctcgactaa
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