Thalassotalea psychrophila: RGQ13_03025
Help
Entry
RGQ13_03025 CDS
T10151
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy00470
D-Amino acid metabolism
tpsy00550
Peptidoglycan biosynthesis
tpsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RGQ13_03025 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGQ13_03025 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
RGQ13_03025 (murD)
Enzymes [BR:
tpsy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RGQ13_03025 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
Precursor biosynthesis
Amino acid ligase
RGQ13_03025 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_8
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
WNC72968
UniProt:
A0ABY9TW04
LinkDB
All DBs
Position
704732..706066
Genome browser
AA seq
444 aa
AA seq
DB search
MTTLALLQDKNILVLGLGATGLSCARFLTSQNVDFVVNDSRQKPPGVARLKQLNNKIQLI
SGCWDVDAIANADLIIASPGVDINLPEIVNNRKAGSELIGDVELFCQLSNCKVIAVTGSN
GKSTVVSILAHLAEYCELDAALAGNIGLPVLDVVNEAKDFVILELSSFQLETMTSMQAVA
ATILNISDDHLDRHQTIENYAQIKHKIFSQSKRRVITREQDLSQPITQFTTDVSFGLDNP
DEGHFGIADVAGIRYLCFGDTSLVACNQLPIVGKHNELNCLAALALGYCAGWPIDKMVKG
LASFEGLDHRCKQVDSGDDIVWVNDSKATNIGATLAAIDGLASSHHKLILIAGGDGKGAN
FNELKPALAHVDHLVTLGKDGPQIAALKADSIQVATLQEAVTASRKLANTGDMVLLSPAC
ASIDMFNNYMQRGDMFIEAIREAS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacaacattggcgttactgcaagataaaaacatattagtgcttggcttaggcgccaca
gggttatcttgtgcgcgttttttgacatcacaaaatgttgattttgttgttaacgattct
cgtcaaaaaccacccggtgtagcaaggttaaagcaattaaataacaagatacaactgatt
agtggttgttgggatgttgatgcaattgctaatgccgatttaattatcgccagccccggt
gttgatattaacttgcctgaaatagtgaacaaccgtaaagcgggaagcgaattaattggc
gatgttgagttgttttgtcagttaagtaactgcaaggttattgctgttacaggctcaaac
ggaaaatcaaccgttgtttcaatacttgcccatttagctgagtattgtgaactagatgcc
gctcttgccggtaatatcggcttgccggtactagatgtggtaaatgaagcgaaagatttt
gtcattctggaattgtctagttttcaacttgaaactatgacttcaatgcaggcagtcgct
gcaacaattttaaatatcagcgatgaccatttagacagacatcaaaccattgaaaattat
gcacaaatcaagcataaaattttcagtcaaagtaaacgtagagtaataacacgcgagcaa
gatttatcgcaacctataactcaatttacaacggatgttagttttggattagataatcct
gatgaagggcactttggtattgctgatgttgcaggtattcgctatttgtgttttggcgat
acaagtttagtcgcttgtaatcagctaccaatagttggtaaacacaacgagttaaattgt
ctagcagcattagcattaggttactgtgctggttggcctatagataaaatggttaaaggt
ttagcctcttttgaaggactagatcaccgttgcaaacaagtcgacagtggtgatgacatc
gtttgggttaatgactcgaaagcaaccaatattggtgcaactttagcggctatcgatggc
ctggcgagtagccaccataaattaattcttattgctggtggtgatggcaaaggtgctaac
tttaatgaattaaaacctgcacttgctcatgtagaccatctagtaactttaggcaaagat
ggtccgcaaatagcggcattaaaagctgatagtattcaagtcgctacattacaagaagct
gtcacagcgagtcgtaaactggcaaatacgggtgatatggttttactgtcgccagcatgt
gccagcatagacatgtttaacaattatatgcagcgcggcgatatgtttattgaagcaatc
agggaggcaagctaa
DBGET
integrated database retrieval system
