Thalassotalea psychrophila: RGQ13_04385
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Entry
RGQ13_04385 CDS
T10151
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy00052
Galactose metabolism
tpsy00511
Other glycan degradation
tpsy00600
Sphingolipid metabolism
tpsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RGQ13_04385
09103 Lipid metabolism
00600 Sphingolipid metabolism
RGQ13_04385
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RGQ13_04385
Enzymes [BR:
tpsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
RGQ13_04385
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
WNC73233
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All DBs
Position
1041593..1044793
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AA seq
1066 aa
AA seq
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MKLLTSKLALLAMFCSLSACAEERQPYEDHTVFAINKIDGHATLFPFQSVSAALNSDKEQ
SSNFILLNGLWQFDWQKSPKNKPQGFEQLSFDDSTWGQIPVPGNWETEGYGYPIYLDERF
PFTTTWPDAPTDYNPIGSYRKPFELPKAWQNKQVFLHIGAAKSSLDVWLNGEKVGFSQGS
KTPAEFDLTPYLTNDNNLLALQIRRWSDASYLESQDMLRISGIERDVYLYATDKQQIFDF
HAKPTLNKDFSQVDFALDVTLKNHLQHVAAEQTVEYQLLDPSNDMNIVMSGTSKLDQQAA
ATDKVSLYGKLANPKLWTAETPNLYTLLITLKDKQGKHLETIRDEIGFRHIEIVNSQLTV
NGKVITIRGVDRHETDPLHGHVVTKESMEKDIKLMKQFNINAVRSSHYPNNPYWYDLTDK
YGMYVIDEANIESHPLAIDEKTQLGNEMSWLPAHLDRTQRMFARDKNHPSIIIWSLGNEA
GEGKVFEATYKWLKDNDGTRPVQYEPAGEEHYTDIFAPMYPSIERLVEYAESKPTRPGIM
IEYAHAMGNSVGNLKDYWQVIEKYDVLQGGFIWDWVDQSLEYTNEDGVKYWAYGKDFHPD
LPSDGNFLNNGLMNANREPHPHAFEVKKVYQAIRFFDKDLLAGKFNVENRFDFINLQQFD
LHWIIEADGKSVAQGTQSLANVLPGETAPFNVSLPKLPETSAEEYFITLSAIIREPQPLL
AAGHELAFAQFKLPIAQTNETVQSSNSAELVKHSDAKQLNLSNSNVNVSFDSKTGWLSQY
QYQGQQLLTAPLMANFWRAPTDNDLGNGMQNWASIWQTAAANLTLTSLQSTPAERGVKVS
AVYSSNVFKGDYQVHYTIANNGQVHVQSQLNIESGQTLANLPRMGMQLTMPGDYQRMSWF
GRGPHESYADRQDSAKISVYKALVKEQIHHYVRPQENANKTDVRWLALKNAQGNGLLAVA
DKLISASAWPYRQSDIDFIVGKDGEESASGLVPVTSKHGAEIPMADLVTVNIDHKQMGVG
GDTSWGRLVHPQYTIPAQNYQYGFTLIPLHEKAADLAELARRFKEK
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactaacgtctaaacttgctttgttagcaatgttttgttctttatctgcctgt
gctgaagaacgtcaaccgtacgaagaccatacagttttcgccattaataaaattgatggc
catgcaaccttgtttccgtttcaatcagtcagtgcagcattaaattctgacaaagagcaa
agcagtaattttatcttgcttaatggcttgtggcagttcgattggcaaaaatcacctaaa
aataaaccacagggttttgagcaattaagttttgatgattcgacttgggggcaaattcct
gttcctggtaactgggaaactgaaggttatggttaccctatatatttagatgaacgtttc
ccgtttaccaccacttggccagatgcgccaacagactacaacccaataggctcgtatcgt
aaaccatttgaattgccaaaagcttggcaaaataagcaagtgtttcttcatattggtgca
gcaaaatcttcattggatgtgtggctaaacggtgaaaaagtcggttttagtcaaggctca
aaaacgccggctgaatttgatttaaccccatacttaacgaatgacaataatctattagca
ttgcaaattcgtcgttggtctgatgccagttatttagaaagccaagatatgttgcgtatt
tcaggtattgaacgcgatgtttatttatacgcaaccgacaaacagcaaatctttgacttt
catgccaagccaacattgaataaagactttagccaagttgactttgcccttgacgttacc
ctaaagaatcacttgcaacatgtagcggctgagcaaacagtagagtatcaactactggac
cctagtaatgatatgaatatagttatgtcaggtactagcaagcttgatcaacaagcagct
gctactgacaaagtttcattgtatggcaaactagccaatcctaaattatggacagcagaa
acgccaaatctttataccttacttattacccttaaagataagcaaggcaagcacttagaa
actattcgtgatgaaattggctttcgtcatattgaaatagtgaatagtcaacttaccgta
aatggtaaagtaatcactattcgcggtgtcgatcgtcatgaaactgacccgctacacggt
catgtggtgactaaagagtcgatggaaaaagacattaaattaatgaagcaatttaatatt
aatgccgtgcgctctagccattatccaaataatccatattggtatgacctaaccgataaa
tacggcatgtacgtaattgatgaagcaaatattgaatctcatccgttagccattgatgaa
aaaactcaactcggtaatgaaatgagttggttaccggcacatcttgaccgtactcaacga
atgtttgctcgtgataaaaaccacccttcaattattatttggtcattaggtaacgaagca
ggcgaaggtaaagtatttgaagccacctataaatggttaaaagataacgacggcactcgc
ccggtacaatacgagccggcaggtgaagagcattacaccgatatttttgcgcctatgtat
ccatcaattgaacgcttggttgaatacgcagaatcaaagcctactcgcccaggtattatg
atcgaatatgcccatgctatgggtaattcagtaggtaatttaaaagattactggcaagta
attgagaagtacgatgtattacaaggtggttttatttgggactgggttgatcagtcgctt
gaatacactaatgaagatggggtgaagtattgggcctatggtaaagactttcatcctgat
ttacctagtgatggtaacttcttaaacaatggtttaatgaatgccaaccgagagccacac
ccacacgcatttgaagtaaaaaaagtctatcaggctatccgtttttttgataaagatttg
ctcgctggtaaattcaacgtcgaaaaccgtttcgattttataaatcttcaacaattcgat
ttacattggattattgaagccgatggtaaatctgttgcccaaggtactcaatccttagca
aacgttttgcctggcgagacggccccctttaatgtcagcttacctaagttgccagaaacc
agcgcagaggagtactttattaccctaagcgcaatcataagagagccgcagccattactt
gctgccggccatgaacttgcttttgcacaatttaaactgccaattgcacaaactaacgaa
acagtgcaaagcagcaatagtgccgaattagttaagcacagcgatgctaagcaacttaac
ttaagcaactcaaatgtaaatgtcagctttgatagtaaaaccggctggttaagtcagtat
caataccaaggtcaacaactgttaactgcaccgttaatggctaatttttggcgcgcacca
acagataatgacttaggcaatggtatgcaaaactgggcgtcaatttggcaaactgcagca
gctaatctaaccttaacgtcattacagtcaacgccggctgaacgcggcgtaaaagtaagc
gccgtatatagcagtaatgtatttaaaggcgattatcaagtgcactacacaatagctaat
aatggccaagtgcatgtgcaaagccagcttaatatcgaatcaggacaaacattagcaaac
ttacctcgtatggggatgcagttaactatgcctggcgattatcaacgtatgtcttggttt
ggtcgcggtccacatgaaagctacgccgatcgtcaagactcggctaaaatatcagtatat
aaagccttagttaaagaacaaattcatcactatgtgcgcccacaagaaaatgctaataaa
actgacgtacgttggttagcattgaaaaatgcacaaggtaatggtttgttagctgtcgcc
gacaaattaattagtgccagcgcatggccataccgtcaaagtgatatcgactttattgtt
ggtaaagatggcgaagagtctgcttcaggtttagttccggttactagtaaacatggtgca
gaaatacctatggctgatttagtaactgtaaatattgaccataaacaaatgggcgttggc
ggcgatacttcttggggccgtttagtgcacccacaatacactatccctgcacaaaattac
caatatggttttactttaattccactgcacgaaaaagccgctgacttagctgagctggct
cgtcgttttaaagagaaataa
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