Thalassotalea psychrophila: RGQ13_05880
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Entry
RGQ13_05880 CDS
T10151
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpsy03032
]
RGQ13_05880
03036 Chromosome and associated proteins [BR:
tpsy03036
]
RGQ13_05880
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_05880
DNA replication proteins [BR:
tpsy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RGQ13_05880
Chromosome and associated proteins [BR:
tpsy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RGQ13_05880
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RGQ13_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WNC73519
LinkDB
All DBs
Position
1384058..1384330
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIEKIAAGADISKAAAGRALDSFIDAVSNELKSGEQVALVGFGTFSVRDRAARQG
RNPQTGATIEIAAAKIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtctcaattaatcgagaaaatcgcagctggtgcagacatttctaaagcagcg
gctggccgcgcactagattcttttatcgatgccgtttcaaatgaattaaaatcaggtgag
caagtagctctagttggttttggtacattctcagttcgtgaccgtgcagctcgtcaaggc
cgtaacccacaaactggtgctacaatcgaaattgcagcagctaaaattccagcatttaaa
gccggtaaagcgcttaaagatgcggtaaactaa
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