Thalassotalea psychrophila: RGQ13_05975
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Entry
RGQ13_05975 CDS
T10151
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03030
DNA replication
tpsy03430
Mismatch repair
tpsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGQ13_05975 (dnaX)
03430 Mismatch repair
RGQ13_05975 (dnaX)
03440 Homologous recombination
RGQ13_05975 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpsy03032
]
RGQ13_05975 (dnaX)
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_05975 (dnaX)
Enzymes [BR:
tpsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGQ13_05975 (dnaX)
DNA replication proteins [BR:
tpsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGQ13_05975 (dnaX)
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGQ13_05975 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_14
AAA_16
PIF1
AAA_18
AAA_5
AAA_7
ResIII
AAA_19
TsaE
ABC_tran
nSTAND3
AAA_24
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
WNC73538
LinkDB
All DBs
Position
1403960..1406308
Genome browser
AA seq
782 aa
AA seq
DB search
MSYQVLARKWRPKDFSQLMGQEHVVTVLVNALMQERLHHAYLFTGTRGVGKTTIARIFAK
SLNCEEGITANPCGKCDVCIDVDAGRFVDLLEIDAASRTKVDDTREILDNVQYAPTRGRF
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFILATTDPQKLPVTVLSRCLQFHLKALTP
LQIETKLNEILTAEEVTFEDGALAMLAKAARGSMRDSLSLTDQAIAQGQGHIEVANVQQM
LGGVDQNWVYKILIALIKQDAKGLLELSKNIASFAPSYHRLLAELLQLLHQVALWQLVPN
SVDVDNQRATLLTKFASAMSPEDVQLYYQIVLNGRKDLSYSSDEQAGFDMVVLRMLAFKP
ATLADTKTAPAAVTADFNDLDIAESIPKVEGKVAKPEAIQDPVVTTIDVKTEEKEEVKTE
VDPQAVLETEDAAIEPQEQVLAEQQLPETLTIDRNADKSIDGLNAEQQQLEVQAQQQLSD
VQQMPTAQNTMQAEMVETDTSVDEVLQPQASTVGAVETAEPVEQSNAGSDVEKMLATRNM
LRSRKKAAEGEGAKKSEAKLKVRTNVGPKNPDLVAPQADDTIVTANVESKTVDAIDLPWE
ENAPINAVDSEVQATNNQQAEVAINDVEQALPDINSIACGSFDQSVIDPAVIRDANQIDA
WANTIDAMGLTGRVRQLALNANMGEESSDNLLVINLDKKFEHLNSGAALTQIIDCYSTLK
KQESTVQINAVDDAGATPFFIQNCINVKRLDYAKNVIATDDFVQALEQQFSAFVDQNSIE
AL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtacttgctcgtaaatggcgaccaaaagatttttctcaattaatggga
caagagcacgtggttaccgtattggttaatgcattaatgcaagagcgtttgcatcatgcc
tatttatttaccggtactcgcggtgtaggtaaaactaccatagcgcgaatattcgcaaaa
agcttaaactgtgaagaaggtattactgctaatccatgtggcaaatgtgatgtttgtatt
gatgttgatgctggccgttttgttgatttacttgagatagatgcagcctcgcgcacaaaa
gtagatgatacacgtgaaattttagataacgttcaatatgcaccaacacgcggtcgcttt
aaggtttaccttatcgatgaagtacacatgttatctaagcacagtttcaatgctttactt
aaaactctcgaagagccaccaccgcacgttaaatttattctcgcaacaaccgatccgcag
aagttgccggtaactgttttatcacgttgtttacagtttcatttaaaagcgctaacgcct
ctgcaaattgaaactaaattaaatgaaattctaaccgcagaagaggttacctttgaagat
ggtgctttagctatgctagccaaagccgctcgcggtagtatgcgtgattcattaagctta
actgatcaagccattgctcaaggccaaggccatattgaagtagccaatgtccagcaaatg
ctcggcggagttgaccaaaattgggtttacaaaatattaattgcactaattaaacaggac
gcgaaagggttattagagctaagtaaaaatattgctagctttgcacctagttaccatcgc
ttgttagctgaattattgcagcttttacatcaagttgcactttggcagttagtaccaaac
tccgttgatgtcgataatcaacgcgcaacgttgttaactaagtttgcctccgcaatgtcg
ccagaagacgtacaactgtattaccaaattgtgttaaatggtcgtaaggacttatcctat
agcagtgatgaacaagctggttttgatatggttgtgctacgtatgttggcctttaaacct
gcgaccttagctgatactaaaactgctccagctgcggttacggctgattttaatgattta
gatatagccgaatctattcctaaagttgaagggaaagtagcaaaacctgaagcaattcaa
gatcctgtggtgacaacaattgacgttaaaacagaagaaaaagaagaagtaaaaactgaa
gttgatccgcaagctgtgctcgaaacagaagatgcagctattgaacctcaagaacaagtg
ttagctgaacagcaattacctgaaacgttaacaattgataggaatgcagataaatcaata
gatggtttaaatgccgagcaacaacagcttgaagtgcaggctcaacaacagttgtctgat
gtgcaacagatgcctacagcacagaatactatgcaagccgaaatggttgaaacagatact
tctgttgatgaagttttgcaaccacaagcttctacagttggagctgttgaaacagctgaa
ccggttgaacaaagcaatgcgggaagcgacgttgaaaaaatgttggctacacgtaatatg
ttacgtagccgtaaaaaagccgcggagggcgagggcgcaaaaaagtctgaagccaagctt
aaggtccgcactaatgttgggcctaaaaaccctgatttagtagcccctcaagctgatgat
acaatcgttacagctaacgttgaatcgaaaacggtagatgctattgatttaccttgggaa
gaaaatgccccaataaacgcagttgactcagaagtacaagcaacaaataaccaacaagct
gaagtagcaattaatgatgtagaacaggcattacctgacattaacagcattgcctgtggt
agctttgatcagtcagttattgatcctgctgttataagagatgcaaatcagattgatgct
tgggcaaatactatagatgcaatgggtttaaccggacgagtaagacaactagctttaaat
gctaatatgggcgaagaaagctcagataatttattagtaattaatttagacaagaaattt
gaacatttaaattcaggtgctgctttaactcaaataatcgattgttactcaaccttgaaa
aagcaagaatcaactgtacaaattaatgcagtagatgatgccggcgcaacgccttttttc
attcaaaattgtattaatgtcaagcgattagattacgctaaaaatgtaattgctactgac
gattttgtgcaagcgttagagcaacaatttagtgcttttgttgatcaaaattcaattgaa
gcattgtaa
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