KEGG   Thalassotalea psychrophila: RGQ13_06000
Entry
RGQ13_06000       CDS       T10151                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tpsy  Thalassotalea psychrophila
Pathway
tpsy03030  DNA replication
tpsy03430  Mismatch repair
tpsy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tpsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RGQ13_06000
   03430 Mismatch repair
    RGQ13_06000
   03440 Homologous recombination
    RGQ13_06000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpsy03032]
    RGQ13_06000
   03400 DNA repair and recombination proteins [BR:tpsy03400]
    RGQ13_06000
Enzymes [BR:tpsy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RGQ13_06000
DNA replication proteins [BR:tpsy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RGQ13_06000
DNA repair and recombination proteins [BR:tpsy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RGQ13_06000
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WNC73542
UniProt: A0ABY9TXF5
LinkDB
Position
1410635..1411255
AA seq 206 aa
MPNTNANSIVVLDFETTGLSPQQGDRAIEIGAVKIVDGIVVDSFQELMNPGRPVSTFIAE
YTGITNAMLRTAAPCDEVMDSFADFIGDENLLAHNASFDKKFLDAEFARINHNYVGEFAC
TLLTSRRIYQDAPNHKLGTLVNYKNLAEDGTFHRALFDAEMTAKLWLKILEDISEEYFLD
NIDFKLIQKLSLLPKAKVAKFLQTYR
NT seq 621 nt   +upstreamnt  +downstreamnt
atgccaaacaccaatgccaattctatcgttgtactcgattttgaaaccacaggtctttct
ccacaacaaggcgacagggcaatagaaataggcgcggttaaaattgttgatggtattgtg
gttgattcatttcaagagttaatgaatccagggcgaccggtaagcacttttattgccgaa
tatactggtattactaatgctatgctgcgcactgcggcaccatgtgatgaagtgatggac
agtttcgctgattttataggtgatgaaaatttacttgctcataacgcgtctttcgataaa
aagtttttagatgcagagtttgctcgcataaatcataactatgttggtgagtttgcctgt
acgttattaacctcaagacgaatttatcaagatgcgccaaaccataaacttggcacatta
gtgaattataaaaatctcgctgaagatggaactttccatagagcgttatttgatgctgaa
atgaccgcaaaattatggcttaaaattctagaagatatatcagaagaatattttctagat
aatatcgattttaaactcatccagaaactatcacttttgccaaaagcaaaagtggccaag
tttttacaaacttaccgctaa

DBGET integrated database retrieval system