KEGG   Thalassotalea psychrophila: RGQ13_08410
Entry
RGQ13_08410       CDS       T10151                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
tpsy  Thalassotalea psychrophila
Pathway
tpsy00010  Glycolysis / Gluconeogenesis
tpsy00020  Citrate cycle (TCA cycle)
tpsy00260  Glycine, serine and threonine metabolism
tpsy00280  Valine, leucine and isoleucine degradation
tpsy00310  Lysine degradation
tpsy00380  Tryptophan metabolism
tpsy00620  Pyruvate metabolism
tpsy00630  Glyoxylate and dicarboxylate metabolism
tpsy00640  Propanoate metabolism
tpsy00670  One carbon pool by folate
tpsy00785  Lipoic acid metabolism
tpsy01100  Metabolic pathways
tpsy01110  Biosynthesis of secondary metabolites
tpsy01120  Microbial metabolism in diverse environments
tpsy01200  Carbon metabolism
tpsy01210  2-Oxocarboxylic acid metabolism
tpsy01240  Biosynthesis of cofactors
Module
tpsy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
tpsy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tpsy_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
tpsy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
tpsy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:tpsy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RGQ13_08410 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RGQ13_08410 (lpdA)
   00620 Pyruvate metabolism
    RGQ13_08410 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RGQ13_08410 (lpdA)
   00640 Propanoate metabolism
    RGQ13_08410 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RGQ13_08410 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RGQ13_08410 (lpdA)
   00310 Lysine degradation
    RGQ13_08410 (lpdA)
   00380 Tryptophan metabolism
    RGQ13_08410 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RGQ13_08410 (lpdA)
   00670 One carbon pool by folate
    RGQ13_08410 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpsy04147]
    RGQ13_08410 (lpdA)
Enzymes [BR:tpsy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RGQ13_08410 (lpdA)
Exosome [BR:tpsy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RGQ13_08410 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored FAD_binding_2 NAD_binding_8 HI0933_like AlaDh_PNT_C UDPG_MGDP_dh_N FAD_binding_3 OB_RNB MCRA 3HCDH_N
Other DBs
NCBI-ProteinID: WNC74000
LinkDB
Position
2109989..2111404
AA seq 471 aa
MSSISCKVLVVGAGPGGYVAAIRAGQLGLDTVIVEGDRAGGTCLIRGCIPSKALIHAATR
FEEINAHTGAGKLGITVSQPAQLDMPKLIDWKESIVARLSGGVESLLKKNKVNHVKGWAT
FSDAKNCTVETADGPVTIKAENVILANGSTATELPFLPYSENVISSTEALEQQELPNHLV
VIGAGYIGLEMGIAYRKLGAKVTFIEGMDRILPLYDKELTKPVADWLKKHDVKIEYKARA
QGVVDHGSDDGATLTYTDKKGIEHAIHGDKVLVTVGRRPNTKGYGLENMCIDMDGPFVKV
DNQCRTAMKGVWAIGDLVGEPMLAHKASAQGEMVAEIISGLKREFNPTVIPAVCFTEPEL
VGVGLTPDDASAQGIKTKVGKFPFAAIGKALAMEAGSDGGFVRITAREDNHVVIGIHAVG
AHVAELSNQFATAIEMGARLEDLANTIHVHPTLGEATMEAAMASLGHAIHI
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgagttcaatttcatgtaaagtattagtggtaggtgctggcccaggtggctacgttgcg
gcaattcgtgctggtcaacttggtttagacaccgttatcgttgaaggcgacagagccggc
ggtacgtgtttaatacgcggttgtattccgtcaaaagcattaattcatgcggctactcgt
tttgaagaaattaatgctcataccggtgctggtaagctaggaataaccgtatcgcaacct
gcgcagttagatatgcccaagctgattgattggaaagaatcgatcgtggcacgattaagc
ggcggcgttgaaagcttacttaaaaagaacaaagtaaaccatgttaaaggttgggcaacg
ttttctgatgcgaaaaactgcaccgttgaaactgcagacggtccggtaaccataaaagct
gaaaacgttattttagcgaatggctcaacagcaacagaattgccatttttaccgtacagt
gaaaatgttatttcgagcactgaagcactagaacagcaagaattgccaaatcatttagtg
gtgattggagccggctatattggtttagaaatggggattgcttatcgtaagttaggtgca
aaagtgacatttattgaaggcatggatcgcattttaccgctatacgataaagagttaacc
aaacctgttgctgactggctgaaaaagcacgatgtcaaaattgaatataaagcgcgagcg
caaggcgttgttgatcacggtagtgacgacggggcaactttaacctataccgataaaaag
ggcattgaacatgctatccacggtgacaaagtattagtcactgttggtcgtcgccctaac
actaaaggctatggccttgaaaacatgtgtattgatatggatggtccatttgtaaaagta
gataaccaatgtcgcacagcaatgaaaggtgtatgggcaattggtgacttagttggcgag
ccaatgcttgctcataaagcttcggcacaaggtgaaatggttgctgaaattatctcaggt
ttaaaacgcgagtttaaccctactgttattcctgcggtatgttttactgagccagaactt
gttggtgtaggcttaacgccagatgatgcaagcgcacaaggcattaaaaccaaagttggc
aaattcccatttgccgcaattggcaaagcacttgcaatggaagcgggcagtgatggcggc
tttgttcgtattaccgcccgtgaagataaccatgtggtgattggtattcatgcggttggt
gcacacgttgccgagctttcaaatcaatttgctacggccattgaaatgggggcccgtttg
gaagatttagccaataccattcacgttcacccaacactgggtgaagccacgatggaagcg
gcgatggcgtctttaggtcatgcgattcatatttaa

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