Thalassotalea psychrophila: RGQ13_08785
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Entry
RGQ13_08785 CDS
T10151
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
RGQ13_08785
Enzymes [BR:
tpsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RGQ13_08785
Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RGQ13_08785
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
DUF3071
Herpes_IR6
Motif
Other DBs
NCBI-ProteinID:
WNC74073
UniProt:
A0ABY9TZP0
LinkDB
All DBs
Position
complement(2185522..2187138)
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AA seq
538 aa
AA seq
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MKKIILPISLTMMVGCQNLEQQTVTSVELPTNAADSTEIYEALLADETAKVIHPKDDVEI
TLTDKDKLAISDNLWHRIQGQLHFDIPQNSKVIAQRNWYAKHQSYLDRVAKRSEPFIHHI
VEELEKHNMPMELVLLPIVESAYDPFAYSHGSASGMWQFLSGTGKQFGLKQDWWYDGRRD
VAASTQAAIKFLRYLNKRFDGDWLLALAAYNSGEGRVARAVKDNARKGKPTDFWNLKLPK
ETRDYVPKLLALADLVKRPEDFGVTLYAIDNQPVVSSIDIGSQLDLALAADLSGLTIDEL
HALNPGFNRWATAPNGPHQLLVPNNKVEKFKLGLSKLKKEDRLSWQRYKIREGDSLGVIA
NRFNTTITVVKEANSLKNNRIRAGKYLLIPTATQSLDRYKSYEQIRVSKLTKKGSGNKFT
HTVKQGDTLWDIGRKYKVSEKSIAKWNAMAPKDMLRLGQKLTIWTGKTASTKTTQTAATS
SNIMRNINYKVRSGDSLARIANKFNVKIADIEKWNKLKRSKYLQPGQLLKLSVNITSI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattatattacctatatcgctaaccatgatggttggttgtcaaaatttagaa
caacaaacagttactagtgttgaattgccaactaatgcagctgattctactgaaatctat
gaagcattattagctgatgaaaccgcaaaagttatccatcctaaagatgatgttgaaata
accctcaccgataaagacaagctcgccatttctgataacctttggcacagaattcaaggg
cagctgcattttgacataccgcaaaacagcaaagttatcgcccagcgtaactggtatgcc
aaacatcaaagctacctagaccgtgttgcaaagcgttcggagccttttatacatcatatt
gttgaagagctagaaaaacacaatatgccaatggagttagtgttattacctattgttgaa
agtgcctacgacccatttgcttactcacacggtagcgcctctggtatgtggcagttctta
tcaggtacaggtaaacagtttggcttaaaacaagactggtggtatgacggtcgacgtgat
gttgcggcatcaacacaagctgcaataaagtttttacgttacttaaataaacgctttgat
ggtgattggctattagctcttgcggcttacaattcaggtgaaggacgagttgccagagca
gttaaagataatgctcgtaaaggaaagccgactgacttttggaacttaaaactgccgaaa
gaaactcgtgattacgtaccaaaacttttagcattagccgacttagttaaacgtcctgaa
gattttggcgtaactctatatgcaatagataatcagccggttgtaagctcaatagatatt
ggctcacaattagatcttgctttagctgcagatctttcaggtttaactattgatgaacta
cacgcacttaaccctggttttaaccgttgggcaacggcacctaatggccctcatcaatta
ctagttccaaataataaagttgaaaaattcaaacttggtttaagcaagcttaaaaaagaa
gacagattatcttggcaacgttataaaattcgtgaaggcgacagtttaggtgttattgca
aatcgttttaatactacgattaccgttgttaaagaagcaaacagcctcaaaaataataga
attagagcgggtaagtatttattgatcccaacggcaactcaatctttagatcgttataaa
tcttacgaacaaattagagtatcaaaactaactaagaaagggtctggtaataaatttacc
cacacggttaaacaaggtgacacactttgggatattggtcgtaaatataaagtgtcagaa
aaaagcattgctaaatggaacgcaatggcacctaaagacatgttgcgtttaggtcaaaaa
ctaactatttggacgggtaaaactgcttcgactaaaaccacacaaacagcggcgactagt
agcaacataatgcgtaacattaactacaaagtacgctctggtgattcattagcgcgcatt
gcaaataagtttaatgtgaaaattgccgacattgagaagtggaataaattaaaacgcagt
aagtatctgcaacctgggcaattgcttaagttatcggtaaatatcaccagtatttaa
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