Thalassotalea psychrophila: RGQ13_10880
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Entry
RGQ13_10880 CDS
T10151
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RGQ13_10880 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_10880 (uvrB)
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RGQ13_10880 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RGQ13_10880 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
MYO6_lever
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
WNC70637
UniProt:
A0ABY9TP70
LinkDB
All DBs
Position
complement(2675442..2677439)
Genome browser
AA seq
665 aa
AA seq
DB search
MSKEFQIVSDYTPSGDQPTAIAKLMDGLDSGLAHQTLLGVTGSGKTFTVANVIAKQQRPT
MILAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASINEHIE
QMRLSATKALLERRDVVIIASVSAIYGLGDPDSYLKMMLHLRQGDIINQRDILRRLAELQ
YKRNDVAFQRATYRVRGDVIDIFPAESDRLAIRIELFDEEVERISQFDPLTGQVESVLPR
ITIYPKTHYATPREKILAAVDKIKVELKERATQLKDNNRLVEEQRIVQRTQFDIEMMTEL
GYCSGIENYSRYLSGREPGDAPPTLFDYLPDDGLLILDESHVTVPQIGAMYKGDRSRKQN
LVEYGFRLPSALDNRPMKFDEFTSISPQTIYVSATPSDYEIDKSSGEIAEQVVRPTGLLD
PEIEVRPVETQVDDLLSEIKIRVAKNERVLATTLTKRMAEDLSEYLIEHGVATRYLHSDV
DTVERMEIIRDLRLGVFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIG
RAARHLEGKAILYAARITKSMKKAIDETERRREKQHNYNIDNGITPKGLVKKIQDVMGVG
SGLKEGNLKVASPKAEQHILTTTEIDKKVASLENEMFDHARNLEFEKAAACRDEISKLRN
LQLKT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaatttcaaatcgtctctgattataccccaagtggcgatcaacctactgct
atagctaagttaatggatggtttggactctggtttagcgcatcaaacactcttgggtgtt
actggctcaggtaagacctttaccgttgcaaatgttattgccaaacaacagcgcccaacg
atgatattagcaccgaataaaacgctcgcagctcagctttatggggaaatgaaggaattc
ttccctcataatgcggttgagtactttgtttcatattatgattattaccaacctgaagcc
tatgtgccgacgaccgatacatttattgaaaaagatgcatctatcaatgagcatattgaa
caaatgcgtttatcggcaactaaagcactattggaacgtcgagatgtcgtgattattgca
tctgtatcggcaatatatggtttaggagatccggattcttatttgaaaatgatgttgcac
cttagacagggcgatataattaatcaacgcgacattttaagacgtttggctgaattacaa
tacaaacgtaatgatgttgcgtttcaacgtgcgacatatcgcgttagaggcgatgtaatt
gatatatttccagctgaatcggatagacttgctattcgtatagagttatttgatgaagaa
gtagagcgtattagtcaatttgatccgcttactggacaagtcgagagtgttttaccacgt
attactatttatccaaaaactcactatgcgacaccacgagaaaaaatacttgcggccgtg
gataaaattaaagttgaattgaaagagcgagcaacgcaactaaaagacaacaatcgtctt
gttgaagagcaacgtattgtacagcgcactcagtttgatattgagatgatgactgaacta
gggtattgctcggggattgaaaattattctcgttatttgtctggtcgtgaacctggtgat
gcgccaccaactttattcgattatttaccggatgatggtttgcttattttagatgagtca
catgttactgtgccgcaaataggcgcaatgtataaaggcgaccgatcacgtaaacaaaat
ttggttgaatacggctttcgattaccttctgcacttgataatagaccaatgaagtttgat
gagttcacctctatttcaccacaaacaatttacgtgtcagcaacgccaagtgattatgaa
attgataaatcttcgggtgaaattgccgagcaagttgtaaggccaacaggcttattagat
cccgaaattgaagttcgccctgtagaaacccaagtagatgacttactgtctgaaattaaa
ataagggtggctaaaaatgagagagttttagcgactacattaacaaaaagaatggcagaa
gatttaagtgagtatctaatcgaacatggcgtcgctacgcgttatttgcattcagatgta
gatactgttgaacgcatggaaattattcgtgacttaaggttaggtgtattcgatgtattg
atcggtattaacttattgcgcgaaggtttagatttacctgaagtgtctttagtagctatt
ttagatgctgataaagaaggtttcttacgttcagagcggtcgttaattcaaaccattggt
cgcgctgcccgtcatttagaaggcaaggcgattttatatgctgccagaattactaaatcg
atgaaaaaagcgattgatgaaacggaacgacgacgtgaaaaacaacacaactataacatt
gataatggcattacaccaaaagggctagttaagaaaatacaagatgttatgggtgttggc
agtggattaaaagaaggaaatttaaaggttgcttcacctaaggcagagcaacatatttta
actactacagaaatagataaaaaagttgctagccttgaaaatgaaatgtttgatcatgca
cgcaatttagagtttgaaaaagcggctgcatgtagagatgaaatatctaaactacgaaat
ttacaactaaaaacataa
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