Thalassotalea psychrophila: RGQ13_11695
Help
Entry
RGQ13_11695 CDS
T10151
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGQ13_11695 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpsy03019
]
RGQ13_11695 (recQ)
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_11695 (recQ)
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGQ13_11695 (recQ)
Messenger RNA biogenesis [BR:
tpsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGQ13_11695 (recQ)
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RGQ13_11695 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
WNC70794
LinkDB
All DBs
Position
2860843..2862642
Genome browser
AA seq
599 aa
AA seq
DB search
MNNTPLNILNNVFGYSQFRHQQAQIIDDVLAGNDVFNLMPTGGGKSLCYQIPSLVLNGVG
IVVSPLIALMQDQVNALTLLGIKAAFLNSTQDYATQQTIEQQLINNDIDILYVAPERLLM
EKTLSLLERINIALFAIDEAHCVSQWGHDFRPEYQQLSLLRQRFPNVATIALTATADERT
REEIINVLGLTNAQKFVHSFDRPNIQYRIHQNSVGKEGLLRFINDEHPNDCGIVYCLSRK
SVESTAAWLASKGKNALPYHAKLPTTVKEDHLNRFLREDNVIIVATIAFGMGIDKPNVRF
VAHLNLPKNIEAYYQETGRAGRDGLPSTAWMSYRMQDVIQLRQMTESSQGSELFKQVTQR
KLNALLGYCEVSDCRRKAILNYFSEDYSAPCGNCDNCLNPPKTFDGTLAAKKALSTVYRS
EQSFGALHQVDILLGKTNEKITRFNHQNLSVFGIGKEHTDKEWQGVFRQLVAMGYLGVDL
QYGALKLTEKSRDILQDKTQIQFREIPKTVKQPKTKKAPKQHIDLSTSDNLVFEQLRDLR
TTWAKEKGVPAYVIFHDATLKALAQKKPTTMDELKDISGIGCAKAERYGAEVVKVIKGL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaataacacaccactgaatattttaaacaacgtgttcggctatagccaatttcgccat
cagcaagcgcaaattattgatgacgtattagccggtaatgacgtatttaacttaatgcca
accggtggtggtaaatcactgtgttatcaaatcccgtcattggtattaaacggcgttggt
attgtggtgtcaccacttatcgccctgatgcaagaccaagttaatgcgttaacgttactc
ggcattaaggctgcatttttaaattctacacaagactatgccacgcaacaaaccattgaa
cagcaacttattaataacgacattgatattttatatgtcgcgcccgaacgcttgctaatg
gagaaaaccttatcgctgctggagcgtattaatattgcgcttttcgccattgatgaagcg
cactgtgtatcgcaatggggccatgatttcagacctgaataccaacaactgagcctattg
cgccagcgtttccccaatgttgccactattgctttaaccgccaccgccgatgaacgcacc
agagaagaaatcattaacgtactgggcttaaccaatgcccaaaaatttgtgcacagtttc
gatcggccaaacattcaatatcgcattcatcaaaatagtgttggcaaagaaggcttatta
aggtttattaatgacgaacaccctaatgattgcggcattgtttattgtttatctagaaaa
tcggttgaatcaaccgccgcgtggttagccagtaaaggcaaaaatgcactgccctatcat
gcaaaattacccactacggtaaaagaagatcacctaaaccgttttttacgtgaagacaac
gtaattattgtcgccaccattgcctttggcatgggcatagataaaccaaacgtgcgcttt
gttgcccatttaaacctgcccaaaaacattgaagcttattatcaagaaactggccgagcc
ggcagagatggcttaccgagcactgcctggatgtcgtatcgcatgcaagatgtaattcaa
cttaggcaaatgacagaaagcagccaaggcagtgaactatttaaacaagttacccaacgt
aaattaaacgccttacttggttactgtgaagtgagtgattgtcgaagaaaagcgatacta
aattatttctcagaagactatagcgccccctgcggaaactgtgacaactgcttaaacccg
ccaaaaacctttgatggtaccttagccgctaaaaaagcgttatcaacggtgtaccgcagt
gagcaaagttttggcgcactgcaccaagtagatatattacttggtaaaacaaacgagaaa
ataacacgttttaatcatcaaaatttatcagtttttggcattggcaaagaacacaccgac
aaagaatggcaaggcgtattcagacaactggttgctatgggctacttaggtgtagatctg
caatacggcgcattaaagctcaccgaaaaatcgcgcgatatattacaagataaaacccag
attcaatttagagaaattcctaaaaccgtaaaacaaccaaaaactaaaaaagcgccaaaa
caacacatagacctttcaacatcagacaacctggtatttgaacaattacgcgatttaaga
acaacctgggccaaagaaaaaggcgtgcccgcctacgttattttccacgacgcaacccta
aaagcactggcccagaaaaaaccaacaaccatggacgagcttaaagacattagcggaata
ggctgcgccaaagcagagcgatatggcgctgaggtggttaaagttattaaaggactctag
DBGET
integrated database retrieval system
