Thalassotalea psychrophila: RGQ13_12080
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Entry
RGQ13_12080 CDS
T10151
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpsy03032
]
RGQ13_12080 (gyrA)
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_12080 (gyrA)
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RGQ13_12080 (gyrA)
DNA replication proteins [BR:
tpsy03032
]
Prokaryotic type
DNA Topoisomerases
RGQ13_12080 (gyrA)
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGQ13_12080 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
WNC70869
UniProt:
A0ABY9TQM3
LinkDB
All DBs
Position
complement(2961147..2963867)
Genome browser
AA seq
906 aa
AA seq
DB search
MTDMAKEIVPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSALGNDWN
KGYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMQKISHAILADLDKETVDFVPNYDGQEYMPAVMPTRVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCIALIDNNDITIDELFEFIPAPDFPTAGIISGVAGIQEAYRTGRGKL
NIRARASIEVHETTGKETIVVHELPYQVNKARLIEKMAELVKEKRLEGISALRDESDKDG
MRMVIEVKRGEVGEVILNNLYKLTQMQVSFGMNMVAIDNGQPKLFNLKAMLEAFVLHRRE
VVTRRTIFELRKARERAHLLEGLAVALSNIDPIIELIKKSPTPAEAKEGLLSQGWTLGTV
AEMLERAGDDAARPEWVEPGFGIVDGKYHLTMQQAQAILDLRLHKLTGLEHEKILTEYKE
LLEIIAELLHILGSPERLMEVIREELEAIRDEFGDERRTEISLASHDLSLEDLITEEDVV
VTLSHEGYVKYQPLSEYEAQRRGGKGKAATKMKEEDFIERLLVANTHDTILCFSDRGRMY
WLKVYQLPLATRTARGRPIVNVLPLESDERITAILPVREYEEDKFIIMATASGTVKKTPL
TAYSRPRANGIIALNLRDDDTLIGVDITDGTNDIMLFSDAGKVVRFNEKKRDSETGAIKT
DPETGEELWALKPIGRTGTGVRGIKLEGEQKVVSLIIPRTEGAILTVTENGYGKRTELAE
YPAKSRATKGVVSIKVSERNGNVVGAVQVEDADEIMIITDNGTLVRTRVNEVSIIGRNTQ
GVRLIRTSDDENVVGLQRIDEIEEVEELPSEEGSDAPTSESSEVTSSEESTEASVDAADE
ESDTEE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatggctaaagaaatcgttcctgtcaatattgaagatgaattaaaaaactct
taccttgattacgccatgagtgtaattgttgggcgtgcattgcctgacgtaagagatggt
ttaaaaccagttcatcgtcgtgttctttatgcaatgagtgcattaggaaatgactggaat
aagggctacaaaaaatctgcccgtgttgttggtgacgtaattggtaagtatcacccccat
ggtgacactgctgtatatgacactatcgttcgtatggctcagccattctccttacgttat
atgctagttgacggccaaggtaactttggttctgttgatggcgactctgctgcggcaatg
cgttataccgaaattcgcatgcaaaaaatatcgcatgcaattttagctgacttagataaa
gaaactgtcgactttgtacctaactatgatggtcaggaatacatgccggcagttatgcct
acccgcgtaccaaaccttttagttaatggttcttctggtatcgccgttggtatggctaca
aatattcctccacataatttaactgaagtaatcaatggttgtatcgcgcttatcgataac
aacgacattactatcgatgagttatttgaattcattccagcgccagatttcccaactgcg
ggtattatcagtggtgttgctggtattcaagaagcgtaccgtactggtcgtggtaaatta
aatatccgcgcccgtgcgagcattgaagttcatgaaacaactggtaaagaaactatcgtt
gttcatgagttgccgtatcaagtgaacaaagctcgcttgattgaaaaaatggcggaactg
gttaaagaaaaacgtttagaaggcatttcagccctacgtgacgagtctgataaagacggt
atgcgtatggttattgaagtcaaacgtggtgaagtaggcgaagttattttaaataactta
tataagcttacgcaaatgcaagtttcttttggtatgaacatggttgctatcgataatggc
caacctaagttatttaatcttaaagcgatgcttgaagcatttgtactacatcgccgtgaa
gtggtaactcgtcgtactattttcgaattacgcaaagcgcgagaacgtgctcatttactt
gaaggtttagctgttgcgttaagtaacattgatcctatcattgaactgattaagaaatct
ccaacacctgcagaagctaaagaaggcttattaagtcaaggttggacgctaggtactgta
gctgaaatgcttgaacgtgctggtgatgacgctgctcgtcctgaatgggttgaacctggg
tttggtattgtagatggtaaataccacctaacaatgcaacaagctcaagcaatcttagac
ttgcgtttacacaagcttactggtttagaacacgaaaagattctaactgagtacaaagag
ttattagaaattattgctgaattgttgcatattcttggtagcccagaacgtttaatggaa
gttattcgtgaagagctagaagcaatacgtgatgaatttggtgacgaacgtcgtacagaa
atctctcttgcttcacacgatttatctcttgaagatctaatcactgaagaagatgtagta
gtaacgctttctcatgaaggttacgtgaagtaccagccattatcagaatacgaagcacag
cgtcgtggtggtaaaggtaaagccgcaactaagatgaaagaagaagatttcatcgaacgt
ctgttggttgctaatactcatgacactattttatgtttctctgatcgtggtcgcatgtac
tggttgaaggtataccaattacctcttgctacccgtactgcccgtggtcgtccaattgta
aatgttttaccgctagaaagtgatgaacgtatcactgccatattaccggtaagagaatac
gaagaagacaaatttataattatggcaactgcctcaggtacagtgaagaaaacgccttta
acggcttattctcgccctcgtgctaacggtattattgccttgaaccttcgtgatgacgat
accttaataggtgttgatattaccgacggaacaaatgacattatgttgttctctgatgca
ggtaaagttgttcgtttcaatgagaagaaacgtgacagtgaaaccggtgcgattaaaact
gatcctgaaacaggtgaagaactatgggcgttgaaacctatcggtcgaactggtactggt
gttagaggtattaagttggaaggtgaacaaaaagttgtttcacttattattccaagaacc
gaaggcgcaatcttaacggtaaccgaaaatggttatggtaagcgtactgagttagcggaa
tatccagcgaagagccgtgcaactaaaggtgttgtttcaattaaagtaagcgaacgtaac
ggtaacgttgttggcgcagtacaagttgaagatgccgatgagattatgatcatcaccgat
aacggtacattagtacgtactcgtgtgaatgaggttagtatcattggtcgaaatacccaa
ggtgttcgcttaattcgcactagcgatgacgagaacgttgtaggtttacagcgcatcgac
gaaatcgaagaagtagaagagttaccatcagaagagggcagtgatgcaccaacctctgaa
agtagtgaagtaacaagtagtgaagaatcgacggaggctagcgttgatgctgccgatgaa
gagtctgatactgaagagtaa
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