Thalassotalea psychrophila: RGQ13_12140
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Entry
RGQ13_12140 CDS
T10151
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpsy03009
]
RGQ13_12140 (dbpA)
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RGQ13_12140 (dbpA)
Ribosome biogenesis [BR:
tpsy03009
]
Prokaryotic type
rRNA helicases
RGQ13_12140 (dbpA)
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Paralog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WNC70881
LinkDB
All DBs
Position
complement(2973825..2975210)
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AA seq
461 aa
AA seq
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MSQSKFSTLALKPELLTNIESLGYEFMTPIQEQSLPDIIMGKDVIGQGKTGSGKTAAFGL
GLLQKLDVKRFRIQSLVLCPTRELADQVAKELRRLARSIHNIKILTLCGGTPFGPQIGSL
EHGAHIIVGTPGRVEEHVIKGTLNLENLNLLILDEADRMLDMGFQPALDNIVRNSPKHRQ
TLLFSATFPNKIKQISERIMTLPTMVKVESTHDDSSISQHFYHVQDNEERLQALQLLLLE
HKPESCVVFCNTKKDAQLVADELVNFGFSTLSLHGDLEQRDRDETLVRFSNKSTNVLVAT
DVAARGLDIDNLDMVVNFHIALDTEVHVHRIGRTGRAGSKGMACSLYSDKESYKVALLED
YLDQKIIGEQLPNIRALNALPLRPDMITIQISGGKRDKVRPGDILGALTGDKGIKGDQVG
KINVAQNFAYVAIKRNAHKVALKKLEDGKIKGRNFRIRVIR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaatctaaattttctaccctagcattaaaaccagaattattaaccaatattgaa
tcattgggttatgaatttatgacgccgattcaagagcagagtttacccgatattattatg
ggcaaagatgtaattggccaaggtaaaacaggctcaggaaaaactgcagcttttggttta
gggttattacaaaagctagatgttaagcgttttcgtattcaatcattagtcttgtgtcca
acaagagaattagctgaccaagtagcaaaagaattacgcagacttgcgcgctcaattcat
aacataaaaatattaactttgtgtggtggaacaccgtttggaccacaaattggatcacta
gaacatggtgctcatattattgttggtacacctggccgtgttgaagagcatgtaattaaa
ggcaccttaaatttagaaaatttaaatttactcattcttgacgaagcagaccgtatgctt
gatatgggttttcagccagctttagacaatattgttcgcaattcgccaaaacatagacaa
acactcttatttagcgccacttttccaaataaaatcaaacaaatttcagagcgcatcatg
accttaccaacaatggtaaaagtagagtcaacccatgatgatagcagtatctcccagcat
ttttatcatgtgcaagataatgaagagcgcttgcaagcattacagttgttgttgctagaa
cataaacccgaatcttgtgtagtattttgtaatactaaaaaagatgcgcaattagtggct
gatgaattagtcaattttggttttagcaccttatcgttacatggtgacctagaacaacgt
gatagagatgaaactttagtacgtttttctaataaaagtactaatgttcttgttgctact
gatgtcgcagctcgtggtttagatattgataatttagatatggtggtaaattttcatatc
gctttagacaccgaagttcatgtgcatcgcatcggccgtacgggccgagccggtagtaaa
ggcatggcttgttcattatatagcgataaagaaagctataaggtggcattattggaagac
tatcttgatcaaaagattatcggtgaacaattacctaatatccgtgcacttaatgctttg
cctttgcgtccagatatgatcaccattcaaattagtggtggtaaacgtgacaaagttcgt
cctggtgatatcttaggggcgttaacaggtgataaaggtattaagggtgatcaagtaggt
aaaattaatgtcgctcaaaattttgcctatgtagctattaagcgtaatgcccataaagta
gcacttaaaaaactagaagatggcaaaattaaaggccgtaactttagaattcgagtgatt
cgttaa
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