Thalassotalea psychrophila: RGQ13_12150
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Entry
RGQ13_12150 CDS
T10151
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03018
RNA degradation
Brite
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGQ13_12150
Messenger RNA biogenesis [BR:
tpsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGQ13_12150
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RGQ13_12150
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNC70883
LinkDB
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Position
complement(2975846..2977831)
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AA seq
661 aa
AA seq
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MQNSSSDSNLKSNTDVQSSTQILQQHFGFSHFRDGQQQVVDTILNGQSSAAIFPTGSGKS
LCYQLPALVLPHLTLVISPLLALMQDQLEFLASKGISAASIDSMQSKEQSQQVMAGVKSG
HIKILMISVERLNNERFRQFLAHIPISLLVVDEAHCISEWGHNFRPDYLKLPKYKEQFNI
AQTLLLTATATEKVVSDMGEKFAIEHNNIVLTGFYRANLNLHVQGIKQTEKDNYLAQWLN
DKTQSSGIVYVTLQQTAEQVASSLSAKGVAATAYHAGMDSELRQNIQQNFMNGNIKLIVA
TIAFGMGIDKSDIRFVVHYDLPKSIENYAQEIGRAGRDGSPSECLVLANYDNLNILENFV
YADTPEASAISYVINEIIEQAKQHNFQWEVVLNSLSSQSNIRLLSLKTLLVYLELAGLIK
PAYSYFAEYKFKLKCSESELINKFDGERQTFIQAILDSSDKAKIWYALNFERMAVQYPSD
RSRVITAIEYFDEKNLLELQSKQMTEVYQVNSNPMDLALLNNDMYSRFEQKELSEIKRIE
HLLAFFASNSCLSLQLAHYFSDHRLQQPCGHCSVCLGSVALMPPVPQLKPLNEFSFNSIA
KDIIEKLGEKSSATLISRFLCGLTTPIFTKLRVRKLNGFAMFENYRFNDIRSWVEKNIST
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattcaagctcagactcaaacttaaaatcgaatacagacgtgcaatcatctact
caaatactacagcaacacttcggtttttctcattttagagatggtcaacaacaggtcgtt
gacacaatattgaatggccaaagctcagcggctatatttccaacgggctccggaaagtca
ctttgctatcagttacccgcgctagttctgccgcatttaaccttagttatttcgccgcta
ttggcacttatgcaagaccaattagaattcttagcaagtaaaggtattagcgctgcaagt
atcgattctatgcaatctaaggaacaatctcagcaagtaatggcaggggttaaatctggg
catataaaaatattaatgatctcagtggagcgtttaaacaatgaacgttttagacagttt
ttagcacacattcctatttcattgttagtggttgatgaagcgcactgtatatcagagtgg
ggccataactttcgtcctgattatttaaaactgccgaaatataaagaacaatttaatatt
gcgcaaacccttctgcttacagcaacggcgaccgaaaaagtagttagcgatatgggtgaa
aaatttgcgatagagcacaataacatcgttctaaccggtttttatcgtgctaatttaaat
ttgcatgtgcaaggtatcaagcaaacagaaaaagataattatttagcccaatggctaaat
gataaaacacaatcatcaggtatcgtttacgtcaccttacagcaaacagctgaacaggtt
gctagcagtttatcggctaaaggtgtagcagctacagcttatcatgctggcatggacagc
gaattaagacaaaatattcaacagaactttatgaatggcaacattaaactgatcgttgct
accattgcttttggtatgggcatagataaaagtgacattcgttttgttgttcattacgat
ttacctaaatctattgagaattatgctcaagaaattggccgggcaggtcgagatggaagc
ccttctgaatgtttagtgttagccaattatgacaatttaaatattttagaaaattttgtc
tacgcagatacgcctgaagcaagcgcgataagctatgtgataaatgaaattattgaacaa
gctaaacagcataactttcaatgggaagtagtgcttaatagtttgtctagccaatctaat
attcgcttacttagcttgaaaacattgttggtatatcttgaactggcggggttaatcaaa
ccagcctacagttattttgctgagtataagttcaagcttaaatgcagtgaaagtgagttg
attaataaatttgatggtgaaagacaaacctttattcaggcgatactcgactcttcagat
aaagctaaaatctggtatgccctaaattttgaacgtatggcggtgcaatatccaagtgat
cgcagtagggtgattactgctattgaatattttgatgaaaagaatttgttagaattgcaa
agtaaacaaatgacagaggtgtatcaagttaactcaaaccctatggatttagctttgctt
aataacgatatgtactctcgttttgagcaaaaggaacttagtgaaataaagcgtatagag
catctcttagcgttttttgcttcaaatagttgtttaagtttacagcttgctcattacttt
tcagatcaccgtttacagcagccttgtggtcattgttcagtgtgtttaggaagcgtggct
ttaatgcctccagtgccgcagcttaagccgttaaatgagtttagttttaattcaatagcc
aaagatattattgaaaaattgggtgaaaaatcttcagcaacacttattagccgttttcta
tgtggtttaaccactccaatttttactaaacttagggtgagaaaactaaacggttttgcc
atgtttgaaaattatcgctttaatgacatccgttcatgggtagaaaaaaatatctctaca
aattag
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