Thalassotalea psychrophila: RGQ13_12200
Help
Entry
RGQ13_12200 CDS
T10151
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGQ13_12200 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpsy03019
]
RGQ13_12200 (pnp)
03016 Transfer RNA biogenesis [BR:
tpsy03016
]
RGQ13_12200 (pnp)
Enzymes [BR:
tpsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RGQ13_12200 (pnp)
Messenger RNA biogenesis [BR:
tpsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RGQ13_12200 (pnp)
Transfer RNA biogenesis [BR:
tpsy03016
]
Prokaryotic type
tRNA degradation factors
RGQ13_12200 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
KH_SLS1_2
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
WNC70893
UniProt:
A0ABY9TPY8
LinkDB
All DBs
Position
complement(2986653..2988773)
Genome browser
AA seq
706 aa
AA seq
DB search
MTPITKTFEYGQHTVTLETGVIARQATAAVMASMDDTCVLVSVVGKKEAKVGQDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEEETLICRLIDRPIRPLFPDAFTNEVQVIITVVSAN
PEINPDIISLLGTSAALAISGMPFSGPVGAARVGYLNDAYILNPLQSELAESKLDLVVAG
TEAAVLMVESEADVLSEEVMLGAVVYGHEQSQTAINAIKEFAAEVNTPSWEWEAPAKNEE
LTAKIAELATEQVNEAYQITEKAERYEKVSVIRNSVVEQLLSDDAELNVQEAKDLFHDLE
KTVVRGRITQGHPRIDGRDPEMIRALDVMTGVLPRTHGSAVFTRGETQALVAATLGTQRD
AQRIETILGEKTDTFMLHYNFPPYSVGETGFVGSPKRREIGHGRLAKRGMLAVMPTIEEF
PYSIRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGDSHVVLSDI
LGDEDHLGDMDFKVAGTKDGITALQMDIKIEGITKDIMQTALVQAKGARIHILGTMDAAI
NSARDDISQFAPRIHTMKVSQDKIRDIIGKGGATIRQLTEETGTTIEIEDDGTVKIAATS
GEQAEDAINRIKALTAEIEVGTVYTGKVVRIVDFGAFVNVLPGKDGLVHISQIAEERVNN
VSDFLTEGQEVVVKVLEVDRQGRVRLSMKEAVEKPAESTGEAPAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgactccaattactaaaacatttgagtacggacagcacacagtaacactagaaacaggt
gttatcgctcgtcaagcaacagcagccgtaatggcaagcatggatgatacatgcgtatta
gtatctgtagtaggtaaaaaagaagccaaagtaggccaagacttttttccattaacagtt
aactaccaagaaaaaacatatgccgcaggtaaaatacctggtggtttcttcaagcgtgaa
ggccgtccttcagaagaagaaacattaatatgtcgactaattgaccgtcctattcgccca
ttgttccctgacgctttcactaacgaagttcaagtaattattactgttgtttcagctaac
cctgaaattaatccagacattatctcattgttaggtacttctgctgcattagctatttct
ggtatgccatttagtggtccagttggcgctgcacgtgttggttacttaaacgatgcttac
attttaaacccgcttcaatctgaacttgcagaaagtaagttagatcttgttgttgctggt
actgaagctgctgtattaatggttgaatcagaagctgacgttctttcagaagaagttatg
cttggcgctgtagtttatggccatgagcaatctcaaactgcaattaatgctattaaagaa
tttgctgctgaagtaaacactccttcatgggaatgggaagcaccagcgaaaaacgaagag
ctaacagctaaaattgctgaacttgcaacagagcaagtaaacgaagcataccaaattact
gaaaaagctgaacgttacgaaaaagtttctgtaattagaaactcagttgttgagcaactt
cttagcgatgatgctgaacttaacgttcaagaagctaaagacttattccatgacttagaa
aaaacagttgttcgtggtcgtattactcaaggtcaccctcgtattgatggtcgtgatcct
gaaatgatccgtgcattagacgttatgactggtgttcttcctcgtactcatggttcagct
gtgtttacacgtggtgaaactcaagcattagttgctgctactcttggtacacaacgtgac
gcacaacgtattgaaacaattttaggtgaaaaaactgacacctttatgttgcattacaac
ttccctccatacagtgtaggtgaaactggttttgttggttctccaaagcgtcgtgaaatt
ggtcacggtcgtttagctaaacgcggtatgttagctgttatgccaactattgaagaattc
ccgtattcaatacgtgttgtttctgaaattactgaatcaaatggctcgtcttcaatggct
tctgtttgtggtacttcattagcacttatggatgctggtgttccaattaaagcttctgtt
gccggtattgcaatgggtctagttaaagaaggtgacagccacgttgttctttctgacatc
ttaggtgatgaagatcacttaggcgacatggactttaaagttgcgggtactaaagacggt
atcactgctttacaaatggatatcaaaattgaaggtatcactaaagatattatgcaaact
gcacttgtacaagcaaagggcgcacgtattcatatcttaggtacaatggatgcagcgatt
aactctgctcgtgatgatatctctcaatttgctcctcgtatccatacgatgaaagttagc
caagataaaatccgtgacatcattggtaaaggcggcgcaacaattcgtcaacttactgaa
gaaactggtactacgattgaaatcgaagatgacggtactgttaaaattgcagctacatca
ggcgaacaagctgaagatgcaatcaatcgcattaaagcattaacggctgaaatcgaagtt
ggtactgtttacactggtaaagttgtacgtatcgttgattttggtgcgttcgtaaatgta
ttacctggtaaagatggtttagttcacatttcacaaattgctgaagagcgtgtgaacaac
gtgtctgatttcttaactgaaggtcaagaagttgttgttaaagttcttgaagttgaccgt
caaggccgtgtacgtctaagcatgaaagaagcggttgaaaaaccagctgaatcaactggc
gaagcacctgctgctgagtaa
DBGET
integrated database retrieval system
