Thalassotalea psychrophila: RGQ13_12215
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Entry
RGQ13_12215 CDS
T10151
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpsy03016
]
RGQ13_12215 (truB)
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RGQ13_12215 (truB)
Transfer RNA biogenesis [BR:
tpsy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RGQ13_12215 (truB)
Prokaryotic type
RGQ13_12215 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WNC70896
LinkDB
All DBs
Position
complement(2990934..2991875)
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AA seq
313 aa
AA seq
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MAKRRKGRQIDGVLLLDKPYEMSSNSALQATKRIFFANKAGHTGALDPLATGMLPICFGE
GTKFSQFLLDIDKTYIVTAKLGIRTTTSDADGEVVAEKPVNVTDAELLPALESFRGDTKQ
VPSMYSALKHKGQPLYKYAREGITIEREARDITVFRLDLLRFEGDEVDLEIHVSKGTYIR
TIVDDLGELLGCGAHVSMLRRTAVGNYPIDKMVTMEHLDTILADAKAQDISPYDALDSLL
LPMDSAVYILDSVTIDAESARFLRFGNPVSINSAPATDTLLKVYIGEEQEFIGVGIINDD
GMLAPKRIVVDHQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgcagaaaaggtcgtcaaatagacggcgttttgttacttgataagccttat
gaaatgtcttcaaattctgcactgcaggccactaaacgaatattctttgctaataaagca
ggtcataccggtgcgttagatccattagccactggcatgctacctatttgttttggcgaa
ggtactaagttttctcagtttcttttagatattgataaaacttatatcgttactgctaag
cttggtattcgtactactactagtgatgccgatggtgaagttgttgctgaaaagcccgtt
aatgttacggatgctgagttattacctgcgttagagtcatttcgtggtgacacaaagcaa
gtgccatcaatgtattcagcgttaaaacataaaggccaacctttatataaatacgcccgt
gaaggcattaccattgaacgtgaagcccgagatattactgtctttcgcctagacttactg
cgctttgaaggcgatgaagttgatttggaaattcatgtatcaaaaggcacatacatacgc
actattgttgacgatttaggtgaactattaggctgcggtgctcatgtaagtatgctgcgc
cgtactgctgttggtaattacccaatagataaaatggtcacaatggagcatttagatacg
attttagctgatgctaaagcgcaggacataagcccgtatgacgctttagactcgttatta
ttacctatggactctgcagtttatattttagactcggttaccattgatgctgaatcggcg
cgtttcttacgttttggtaatccagtatcaataaattctgcaccggcaacagatacgtta
ttaaaagtatatattggcgaagaacaagagtttataggtgtaggtattatcaatgatgat
ggaatgttagcacctaagcgcatagtagttgatcatcaataa
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