Thalassotalea psychrophila: RGQ13_12450
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Entry
RGQ13_12450 CDS
T10151
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpsy03036
]
RGQ13_12450 (smc)
Chromosome and associated proteins [BR:
tpsy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RGQ13_12450 (smc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_29
SMC_hinge
AAA_23
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WNC70940
UniProt:
A0ABY9TT71
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All DBs
Position
complement(3048192..3051680)
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKTIKLAGFKSFVDVTTVPFPEEMTAIVGPNGCGKSNIIDAVRWVLGESSAKNLRGDS
MTDVIFNGSSARKPVGQASVELLFDNTDQRIQGSMADRNEISIRRIVNRDSQNTYYLNGS
KCRRKDITDIFLGTGLGPRSYAIIEQGMISKLIESKPQDLRVFIEEAAGVSKYKERRRET
EIRIRHTRENLSRLADIRQELGIQIERLHGQSQAAVRFKQLKVKERTLKAELTAIKWRYC
QDKLQKFKLLELSLERKIDELVAEQRASELAIVNAKNTQDEGADKIAVLQQHKLVLTTEI
TRLEQNIKHAKQRKISLSEDVKRLDENSLRNREYLNQELKKQQNLKSLIVDLVPCLKESG
TQIKQLSKQLLDIQHRQHAWQTHWDNFVQTQSSHTNAVNVIATKVQSTSDLMNKTEQRIE
SIKQQLTSYQLEPLKSKIVQNQDDIEEQKMVVEQSSADVEQYTEQYLIAITAQDKSKTLF
EQISTELQTLQSRQQALSEINNQRSDWQIKQKDYLQSMGIDTQNSLSEQLLVTPGWESAV
EMVLGQWLNAICLDDFPDHFDLDVALWVSQTENQKLSSAKPNTLAQFVQGQHPFYELLSR
VKVAQTETQAKHMAEQLTDDNASVICPQGAWFGRSWLKKGAIEQHTGQLKRHNQLIDLAA
NIKNKQTEFEIHQQALGELQEKNIRLNASLEQNKQQLQQSKQVLLQSEQENHLLDQELQF
KRTQQQSLQDELLKQETALNEELYTYEQVLAEQAALAQSDQNDNQVGETLQLERTTLVQQ
LQDAQLNLQHATNENHQQNLAKEKAKTELESVEAVLVRVQEQLLTLEQQKQQLVSTVQEN
DQPIIAEQEKLQSLLLQGAENDQQQQTVNKQLIESNNQIEQFNSSQQRLLTLIAVQRDKL
SQLHVDAQTYNVRAKTAIEQLEEMQQTLAAVLDNLTTDAKESQWQIQLARVTKEISQLGA
INLAAIEEFELQSQRKEFLDKQNDDLESALHTLESAIDKIDKETRQKFKETFEQVNNDLK
ILFPKVFGGGSAYLDLTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALSLVFAIF
RLNPAPFCMLDEVDAPLDDANVGRFCKLVEEMSQTVQFIYISHNKIAMEMASHLTGVTMH
EPGVSRMVAVDIDEAVAMAEAV
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaaaaactataaaattagctggatttaaatcttttgttgatgtcacgactgtg
ccgttccctgaagaaatgaccgctattgttggcccaaatggttgtggtaaatctaatatt
atcgatgcagtgcgttgggtgcttggcgaaagttcagctaaaaacttacgcggtgatagt
atgaccgatgttattttcaatggctctagcgctagaaagcctgtagggcaagcaagtgtt
gaacttctgtttgacaatactgaccaacgaattcaaggctcgatggcagatcgaaacgaa
atatcaatccgccgtattgttaatagagactcgcaaaatacttattacctaaatggtagt
aaatgtcgccgtaaagatataaccgatatcttcctaggtaccggtctaggtccaagaagt
tatgccattattgaacaaggcatgatttcaaaattaattgaatcaaaaccccaagatctt
cgagtgtttattgaagaggccgctggcgtatctaaatacaaagaacgccgtcgagaaacc
gaaattcgtattcgtcacactcgtgaaaatttatctcgattagctgatatcaggcaagag
cttggtatacaaatagaacgattgcatgggcaatcacaagccgcagttagatttaaacaa
ttaaaagtaaaagagcgcactttaaaagcggaattaacagcgataaagtggcgctactgc
caagataaattacaaaaatttaaattgctagagctgagcctagaacgcaaaatagatgaa
ttagttgccgagcaaagagcatctgaactcgctattgtaaatgctaaaaatactcaagat
gagggggcagataaaattgctgtactgcaacagcataaattagttttaactactgaaatt
acacgtttagagcaaaatatcaaacatgctaagcagcgtaagataagccttagcgaggat
gtaaaaaggttagatgaaaatagccttcgtaatcgagaatacttaaatcaagagctaaaa
aagcagcaaaacttaaaaagtttgattgttgacttagtaccatgcctaaaagagagcggt
actcaaattaagcaattaagcaaacagttactcgatattcaacatcgccaacatgcttgg
cagacacattgggacaattttgttcaaacacaatcatctcacaccaatgctgtaaatgtt
attgccaccaaagtgcagtcaacaagtgacttgatgaataaaactgaacaacgaattgag
tctataaaacaacaacttactagttatcaactagagcctttaaaaagcaagattgtccaa
aaccaggatgatattgaagaacagaaaatggtcgttgaacagtcatctgcagatgttgaa
cagtatacagagcaatatctgatagcaattacagcgcaggacaaaagcaaaactctattt
gagcaaatatccactgagttgcaaacattacagtcaaggcagcaagcactaagcgagatt
aataatcaacgttcagattggcaaataaaacaaaaagactacttgcaatcaatggggata
gatacgcagaacagtttaagtgagcaactactcgttactcccggttgggaaagtgcggta
gagatggtactaggccagtggttaaatgctatttgtttagatgattttcctgatcatttc
gacttggatgttgccttgtgggtcagtcaaactgaaaaccagaaactaagctctgcgaag
ccaaatacattggctcaatttgttcaaggccagcatccgttctatgaactactaagtagg
gttaaagttgcccaaacagagactcaagccaagcacatggctgaacaattaaccgatgac
aatgcctcggtgatatgtccacaaggggcttggtttgggcgttcatggcttaaaaaaggc
gcaattgagcaacatacagggcagttaaaacgacataatcaacttattgatttagcagca
aatattaaaaataaacagactgaatttgaaattcatcaacaagcacttggtgaattgcaa
gaaaaaaatattagactgaatgcaagtcttgagcagaacaagcaacaactacaacaaagt
aagcaagtacttttgcaaagtgaacaagaaaatcatttacttgatcaagagttacagttc
aagagaactcagcaacaaagcttacaagatgaattactaaagcaagaaactgctcttaat
gaagagttatatacctatgaacaggttttagcagagcaagcggctttagctcaatcagat
caaaatgacaatcaagttggtgaaacattacaacttgaacgcacaactttagttcagcaa
ttgcaagatgctcaattaaacttacagcatgccactaatgaaaatcatcaacaaaattta
gccaaagaaaaagcaaaaactgaactagagtctgttgaggctgtactcgtgcgagtgcaa
gagcaattgttaacactagaacagcaaaaacaacagttagtatctacagtccaagaaaat
gatcagccgattatagctgagcaagaaaagttgcaaagtttattgctacaaggcgccgaa
aatgatcagcagcaacaaacagttaacaagcaacttatcgaatctaacaatcaaatagaa
caatttaacagcagtcaacagcgcttattaacattaatagcagtgcaaagagataaatta
tctcaacttcatgtagatgcgcagacctataatgttcgtgctaaaacagcaattgaacaa
cttgaggaaatgcaacaaacactagcagctgtattagataatttaactactgatgctaaa
gagtcacaatggcaaatacagcttgctcgagtgactaaagaaatatctcaacttggcgcg
attaatttagccgctatagaagaatttgagttgcagtcacaaagaaaagaatttttagat
aaacaaaacgacgatttagagtctgctctgcatacccttgagtcagcaatagataaaata
gataaagaaactcgacaaaaatttaaagaaacatttgaacaggttaataatgatcttaaa
atattgtttccaaaagttttcggtggaggtagtgcgtaccttgatttaactggtgaagat
ttgctcgatacaggggtaactatcatggcaagaccgcctggcaaaaaaaatagcacgatt
cacttactttctggtggagaaaaagcgctaaccgcattatcattagtattcgcaatattt
aggttgaatccagcacctttttgtatgttggatgaagtggatgcgccacttgatgacgca
aatgttggccgattctgtaaattggttgaagaaatgtcacaaactgtgcaatttatctat
ataagtcataataaaatagctatggaaatggcttcacacttaacaggtgttaccatgcat
gaaccaggagtttcacgtatggtagcggttgatattgatgaagcggttgctatggcagaa
gcagtataa
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