Thalassotalea psychrophila: RGQ13_14110
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Entry
RGQ13_14110 CDS
T10151
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy00550
Peptidoglycan biosynthesis
tpsy01100
Metabolic pathways
tpsy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGQ13_14110 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGQ13_14110 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
RGQ13_14110 (mrdA)
Enzymes [BR:
tpsy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RGQ13_14110 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RGQ13_14110 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
SURF1
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
WNC71251
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All DBs
Position
3440986..3442929
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AA seq
647 aa
AA seq
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MAIKHVSIRNHSAEANLFARRAFITFLGVLVMLLILFNNLYELEVNSYEKYQTRSNKNRI
KLLPVAPNRGLIYDRNGVLLAENKPVYSLEIIPEQVKDINKTLDLLASIVNISAEQKTKF
LEAMRYKRRFKPIELISRLNDEQVAKISVSQHLFPGVIIEARLKRYYPFGDLTTHSLGYV
AKINRKDLINLDEQGKSEDYKATRDMGKLGLERYYEDILHGTMGHQEVEVNNQGRILRTL
SFTPPIPGSDITLSLDIELQMIAKRALSGKRGAVVAIDPRDGGILAFYSNPSYDGNLFVH
GISSKNYKKLQNRNRPLINRATKGTYPPASTIKPFLGLTGLESNMITTTSKIWDPGFFKL
KNGKRKYRDHLKWGHGWVTIEEAIMRSCNTFFYDLSYKLGIDRISETMAKFGFGESTGID
IYEESEAIMPSRGWKRARYNQPWYHGDTVNIGIGQGYWTVTPLQLAQATSILVNKGEIKE
PHFLSAIHQVPTLTAEVDHDVQSEMEQTTALTREIIPFEINEKPPIELNNPNSWDIILEA
MHKTVRKPSGTGYRAFLGTKYDAAGKSGTGEVVGRAQDTDYDATKISENNRDNAMFIAFA
PFTAPEIVVAIAIENVAVGGGGSNAGPVARQIMDQYFANKNLVAKIK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtggcaataaaacacgtatcaattagaaatcacagcgctgaggcaaacctgtttgcccga
agagcttttatcacctttttaggtgtattagttatgctattgattttatttaataattta
tacgagttagaagtaaactcttatgaaaaatatcaaaccagatcaaacaaaaaccgtata
aaactattgccagtagcgcctaatcgcggcctgatttatgatcgaaatggcgtattgtta
gctgaaaacaagcctgtttattctttagaaataattcctgagcaagttaaagatatcaac
aaaaccttagatttactcgccagtattgttaatatttcagcggaacaaaaaacaaaattc
ttagaggcaatgcgttacaagcgtcgctttaagccaattgaattaatttctcgtttaaat
gatgaacaagtggctaaaatttcggtaagccaacatttgttccctggggttatcattgaa
gcgcgattaaagcgttattacccttttggtgatttaaccacgcattctttaggctatgtt
gccaaaattaaccgcaaagatttaatcaacctagacgagcaaggcaagtcggaagattat
aaagcgactcgcgacatgggaaaattaggcctagagcgctattacgaagacattctacac
ggcaccatgggccatcaagaagttgaagtaaataaccaaggtcgaattttacgaaccctg
agttttactccaccgatacctggcagtgatatcaccttaagcctagatattgagttacag
atgattgctaagcgagcattatcgggtaaacgtggtgcggtggttgctatcgacccaaga
gatggtggtatattagcattttattcaaatccaagttatgacggtaatttgtttgtgcat
ggtatttcatcaaaaaattataaaaaactacaaaaccgcaaccgtccattaatcaacagg
gcaacaaaaggcacttatccgccagcttcaactatcaaaccgtttttaggattaactggt
ttagaaagtaatatgatcaccacaacatccaaaatttgggatccaggttttttcaagctt
aaaaatggtaagcgaaaataccgtgaccatttaaaatggggacatggctgggtaacaata
gaagaagcgataatgcgctcatgtaataccttcttttacgatttatcttacaaactcgga
attgataggatctcggaaactatggccaaatttggttttggcgaatcaaccggtatcgat
atttatgaagaaagtgaagcgataatgccaagcaggggttggaaacgtgcacgttataat
cagccttggtatcacggtgatacggtaaatattggtattgggcaaggttattggactgtt
acgccattacaattggcgcaagcaacatccattttagttaataaaggcgaaataaaagaa
ccacactttttgtccgcaatacaccaagtcccgacattaactgctgaagttgatcatgat
gtccagagcgaaatggaacaaacaacagcgttaacgagagaaattatcccgttcgaaata
aatgaaaaaccaccgattgaactaaataacccaaacagttgggacattatcctagaagca
atgcataaaaccgtaaggaaaccttctggtactggttatcgcgcgtttttaggaaccaag
tacgacgcagcaggaaaatcagggaccggtgaggttgttggccgcgcacaagacacagat
tatgatgccaccaagatctctgaaaataaccgtgataacgccatgtttatcgcctttgct
ccatttactgcgcctgaaatcgtagtagcaatcgcaatagaaaacgttgcggtgggcggc
ggcggttctaacgcgggccctgtagcaaggcagatcatggatcaatactttgcgaataaa
aatcttgtggcaaagattaaataa
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