Thalassotalea psychrophila: RGQ13_14405
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Entry
RGQ13_14405 CDS
T10151
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy00521
Streptomycin biosynthesis
tpsy00523
Polyketide sugar unit biosynthesis
tpsy00525
Acarbose and validamycin biosynthesis
tpsy00541
Biosynthesis of various nucleotide sugars
tpsy01100
Metabolic pathways
tpsy01110
Biosynthesis of secondary metabolites
tpsy01250
Biosynthesis of nucleotide sugars
Module
tpsy_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RGQ13_14405 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RGQ13_14405 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RGQ13_14405 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RGQ13_14405 (rfbB)
00525 Acarbose and validamycin biosynthesis
RGQ13_14405 (rfbB)
Enzymes [BR:
tpsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RGQ13_14405 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
NAD_binding_10
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WNC71307
LinkDB
All DBs
Position
complement(3523349..3524416)
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AA seq
355 aa
AA seq
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METKHLLVTGGAGFIGANFVHYWLENNPNDKVIVLDALTYAGNQESLSTVEKNQNFEFVH
GDICNTELVEKLLRDKQLNTIVHFAAESHVDRSITGPDAFIETNIIGTYSLLKAAKKVWL
DEPTTAVEHRFHHVSTDEVYGTLGPNDPAFTENTAYEPNSPYSASKAASDHLVRAYHHTY
GLDVTTSNCSNNYGPLHFPEKLIPLVITNILYDKPLPIYGDGQQIRDWLYVEDHARGIEL
VLNKGRIGENYNIGGNNEWANIDIVKVICKLMNEEFANNESIEKNYPLAKSAISGHAESL
ITYVKDRAGHDRRYAIDATKTNSELGYKPVESFDSGIEKTIRWYLENNKWWQPLL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaacatctactagttactggcggtgccggttttattggagcaaacttcgtt
cattattggttagagaataatcctaatgacaaagtaatcgtgcttgatgcattaacgtat
gcaggcaatcaagaaagtttatccactgttgaaaaaaatcagaattttgaatttgtgcat
ggagatatttgcaatacagaattagtagaaaaattattaagagataaacagttaaatact
attgttcactttgctgcagaatctcatgttgaccgatcaattactgggccagatgcattt
attgaaactaatataattggtacatacagtttacttaaagcggctaagaaagtttggtta
gatgaacctacaacagcagtagagcatcgtttccaccatgtttcaactgatgaagtttat
ggtacattaggtccaaacgaccctgcctttacagaaaacacagcgtatgagccgaattca
ccatattctgctagtaaggctgcaagtgatcatttagtacgcgcttatcaccatacttat
ggattagacgttacaacaagtaactgctcaaacaactatggtccattgcattttccagaa
aaacttattccattagttattaccaatattctatatgataagcccttgcctatatacggt
gatggccaacaaattcgtgattggttatatgttgaagatcacgctcgaggtattgaacta
gttctgaataaaggtcgtataggagaaaactataatatcggaggtaataatgaatgggcc
aatattgatattgtaaaagttatctgtaaattgatgaatgaagagtttgcaaacaatgaa
tctatagagaaaaattacccattagccaagtcagctatttcaggtcatgctgaatcactt
attacctatgttaaagatagggctggtcatgatagacgttatgcaattgatgcgaccaaa
acgaatagtgaattaggctataaaccggttgaatcatttgattcaggaattgaaaaaacc
attcgatggtaccttgaaaataacaagtggtggcagccactgctgtag
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