Thalassotalea psychrophila: RGQ13_15190
Help
Entry
RGQ13_15190 CDS
T10151
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpsy03016
]
RGQ13_15190 (truD)
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
RGQ13_15190 (truD)
Transfer RNA biogenesis [BR:
tpsy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RGQ13_15190 (truD)
Prokaryotic type
RGQ13_15190 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WNC71455
LinkDB
All DBs
Position
complement(3686159..3687211)
Genome browser
AA seq
350 aa
AA seq
DB search
MTNAVTELAYLYGKPKSCGDLRSCVDDFKVYEILPFEPGGEGEHLIIHIRKTGANTLFVA
RQLAKYFKVKDALVSYAGLKDRNAVTEQFFGIHLPGKTEYDLSDLNIEGVEVLSYKRHNK
KLKTGALIGNRFELMLRNIDDIEDIKQRWNKILSSGVPNYFGEQRFGQQGNNLTAASELF
NGKKVKDKKKRGFYLSAARSFLFNQFVSERIESEHFCSSMNGDVYMLSGSRSIFSQDEVD
EAITKRLAEKDISITAPLWGSGDIATSNQALNFEQDLASNYNEFCQGLAKFGLKQERRSI
SLFLESGQLEVIDDAIKLSFFLPAGCYATTILRELLQYTDISQSHIEPNN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgcagtaaccgagcttgcttatttgtatggtaagccaaagagttgtggtgat
ttacgcagttgtgttgacgattttaaggtatatgaaatattgccttttgagccaggtggc
gaaggtgaacatttaatcattcatattcgcaaaacaggggctaatactttatttgttgca
cgccagttggccaagtactttaaagtgaaagatgctttggtatcttacgcgggattgaaa
gatagaaatgccgtcacagagcaattctttggtattcatctgccaggcaaaactgaatat
gatcttagcgatttaaatatcgaaggtgtagaagtattatcttacaaacgtcataacaag
aaattgaaaaccggtgcattaattggtaatcgctttgaattaatgcttagaaatattgat
gatattgaagacattaagcaaagatggaataaaatactatcttcaggcgttccaaattac
tttggtgaacagcgctttggccaacaaggtaataacttaactgctgcgagtgaactgttt
aatggtaaaaaagtaaaagataagaagaaacgcggtttttatttgtcggctgcaaggtca
tttttatttaatcaatttgttagtgaacgaattgaaagcgagcacttttgttcttcaatg
aatggcgatgtttatatgctcagtggttcgcgctctatcttttctcaagatgaagttgat
gaagcgataacaaagcggctagctgaaaaagatattagtattactgcgccgctttgggga
tctggggatatagcgacttcgaatcaagctttgaattttgagcaagatttagcaagtaat
tataatgagttttgtcaaggcttagcaaagtttggtttaaaacaagaacgcagaagtata
agtttatttttggagtccggacaattagaagttattgatgatgccataaagttgtcgttc
tttttacctgcgggctgttatgccaccactattttacgagagctgttgcaatatactgat
atctcacaaagccatattgagccaaataactaa
DBGET
integrated database retrieval system
