Thalassotalea psychrophila: RGQ13_16445
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Entry
RGQ13_16445 CDS
T10151
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy00071
Fatty acid degradation
tpsy00280
Valine, leucine and isoleucine degradation
tpsy00310
Lysine degradation
tpsy00362
Benzoate degradation
tpsy00380
Tryptophan metabolism
tpsy00410
beta-Alanine metabolism
tpsy00640
Propanoate metabolism
tpsy00650
Butanoate metabolism
tpsy00907
Pinene, camphor and geraniol degradation
tpsy00930
Caprolactam degradation
tpsy01100
Metabolic pathways
tpsy01110
Biosynthesis of secondary metabolites
tpsy01120
Microbial metabolism in diverse environments
tpsy01200
Carbon metabolism
tpsy01212
Fatty acid metabolism
Module
tpsy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RGQ13_16445 (fadB)
00650 Butanoate metabolism
RGQ13_16445 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RGQ13_16445 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RGQ13_16445 (fadB)
00310 Lysine degradation
RGQ13_16445 (fadB)
00380 Tryptophan metabolism
RGQ13_16445 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RGQ13_16445 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RGQ13_16445 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RGQ13_16445 (fadB)
00930 Caprolactam degradation
RGQ13_16445 (fadB)
Enzymes [BR:
tpsy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RGQ13_16445 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RGQ13_16445 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RGQ13_16445 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
RGQ13_16445 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
RYDR_ITPR
Motif
Other DBs
NCBI-ProteinID:
WNC71691
UniProt:
A0ABY9TTD9
LinkDB
All DBs
Position
complement(3961689..3963860)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQGNGLSAQLLDDGIVELCFDSKGSVNALNIATLEEYKNAIIAIGECSEAKGVVVTSA
KSTFIVGADITEFTELFKTPDDKIAGVFKSSSDIFDMFEDLNMPTIAAINGFALGGGCEV
TLVCDYRVADTTASVGLPEVKLGLIPGFGGTVRLPRVIGIDNALEWMTTGKPYKAAKALE
FGAVDAVVAPENLKSAAIEMLKDAISGQFDWQAKRQEKLVPVALTPIEHAMSFNTAKGMI
FAKAGKHYPAPMILANLLEESVKLDRTQAMLLENSAFGQVAKTDACSAQVGLFLADQVVK
GKAKKAAKIATKKVERAAVLGAGIMGGGIAYQSAYKGTPIVMKDINNAALDLGLSTAAGI
LTKSVDKGRMNAKKMAQTLNNITPTLTYDSIKDVDIVVEAVVENPNVKAAVLKEVEANVS
DDAIITSNTSTISIDLLAESIEKPERFCGMHFFNPVNKMPLVEVIRGKDTSDETVAAVVA
YAAKMGKSPIVVNDCPGFYINRVLFPYFSGFAQLVLEGANYEKVDKVMEKQFGWPMGPAY
LLDVVGIDTADHCTDVMAAGFPTRMAKITNDPSSVLYNEKLLGQKTGSGFYEYSKDKRGR
PQKAVNAKALELFSSICAAETDFTNDEIIARVMIPLVNETVRCLEEGVVATAAEADMGLI
YGLGFPPFRGGPIRYLETVGLQAFIETADKFAHLGEIYQVTDGLREMAASGKSYFNTNVK
TAK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggcaatggcctttctgcccagttacttgacgatggcatcgtcgagttg
tgtttcgattcaaaaggatcagtaaacgcattaaatatagcaacattagaagaatataaa
aacgccattattgctattggcgaatgttcagaagcgaaaggtgttgttgtaacatcagcc
aaatcaacgttcattgttggtgcggatataactgaatttaccgaattatttaaaactcct
gacgataaaattgctggcgtatttaaaagcagcagtgatattttcgacatgtttgaagat
ctcaatatgccaactattgccgccattaatggttttgcgttaggtggtggttgtgaagtt
actttagtgtgtgattaccgagtggcagatacaacagcaagcgttggtttacctgaagtt
aaattaggacttattcctggttttggtggtacggttcgtttacctcgagtaattggtatt
gataatgcacttgagtggatgactactggcaagccatacaaagccgcaaaagcgttagag
tttggtgctgttgatgcagtggttgcacctgaaaaccttaagtcagcggcaattgagatg
cttaaagatgcaatatctggacaatttgattggcaagccaagcgccaagagaagttagta
ccagttgcattaacgccaattgaacatgcgatgagtttcaatactgctaaaggcatgatt
ttcgctaaagctggtaagcactacccagcaccgatgattttagctaacctgcttgaagag
tcagttaagttagatagaactcaagcaatgctactagaaaattctgccttcggacaagtt
gctaaaactgatgcatgttcggcacaagtaggtttatttctagctgatcaagtagtaaaa
ggtaaggccaaaaaagcagccaaaattgcgaccaagaaagttgaaagagccgcggtatta
ggtgctggcattatgggcggcggtattgcataccaatctgcttataaaggcacaccaatt
gtaatgaaagatattaataatgctgctctagatttaggtttaagtacagctgccggaata
ttaactaaatctgtcgataaaggcagaatgaacgctaaaaaaatggcgcaaacattaaat
aatattactcctacattaacttacgacagtattaaagatgttgatattgttgttgaagcg
gtagttgaaaaccctaatgtaaaagctgctgttttaaaagaagtagaagccaatgttagc
gatgatgccattattacttctaatacatcgactatctctatcgatttacttgccgaaagc
atcgaaaagccagagcgtttttgtggcatgcattttttcaacccggtaaataaaatgccg
ttagttgaagttatccgtggtaaagacacttctgacgaaacggttgctgctgttgtcgct
tatgctgcaaaaatgggtaaatcaccaattgttgttaatgattgtcctggtttttatatt
aatcgagtgttattcccttacttttcaggttttgctcaattagtgcttgaaggtgctaat
tatgaaaaagtagataaggtaatggagaaacagtttggctggccaatgggcccggcttac
ctattggatgttgtaggtatagataccgctgatcactgtacagatgttatggctgcgggt
ttccctacacgtatggcaaaaatcaccaacgacccatcaagtgttttatataacgaaaaa
ctattaggtcaaaaaactggatctggcttttatgagtactctaaagataaacgagggcgt
ccacaaaaagcagtgaacgcaaaggcgttagagttatttagctctatttgtgcagcagaa
actgattttactaatgatgagattattgcacgagtgatgatcccactggttaatgaaaca
gttagatgtctagaagaaggcgtagttgcaactgcagccgaggcggacatgggcttaata
tatggtttaggcttccctccatttagaggtggtccaattcgttatttagaaactgttggc
ttacaagcattcatcgaaacagcagacaagtttgctcatttaggtgaaatttatcaagta
accgatggtcttcgagaaatggcagcttctggcaagtcatacttcaacactaacgttaaa
acagctaagtag
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