Thalassotalea psychrophila: RGQ13_16620
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Entry
RGQ13_16620 CDS
T10151
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
tpsy Thalassotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpsy03000
]
RGQ13_16620 (soxR)
Transcription factors [BR:
tpsy03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RGQ13_16620 (soxR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_17
TPR_MLP1_2
PPV_E1_C
NNH2
Motif
Other DBs
NCBI-ProteinID:
WNC71723
UniProt:
A0ABY9TSB7
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All DBs
Position
3995798..3996241
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AA seq
147 aa
AA seq
DB search
MLEEANLAVGTVAKRCGVKVSTLHFYEEKGLIRSWRNQGNQRRYKRDVLRRISVIKAAQK
MGVSLDEIKTVFATLPDKRTPNKDDWAKLSKSWQQQLNQRIAYMEKLRDSLTGCIGCGCL
SMTKCPIYNPEDILGENGIGPLILDKN
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagaagcgaatcttgctgtaggtactgttgccaaacgatgtggcgttaaagtt
tcaaccttacatttttatgaagaaaaagggttgatccgaagttggcgaaatcaaggtaat
caaagaaggtacaaaagagatgttttaaggcgcatatcagttattaaagccgcgcaaaaa
atgggcgtgagcttagacgagataaaaactgtgtttgcgacattacctgataaacgcacg
ccgaataaagatgattgggccaaactgtctaaaagttggcaacaacaactgaatcaacgt
attgcttatatggaaaaattaagagattcattaacaggttgcatcggttgcggttgctta
tcgatgacaaaatgtccaatttataatcctgaggatatacttggtgaaaacggcattggg
ccgttaattttagacaaaaattaa
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