Thalassotalea psychrophila: RGQ13_17175
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Entry
RGQ13_17175 CDS
T10151
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RGQ13_17175 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpsy03021
]
RGQ13_17175 (rpoA)
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_17175 (rpoA)
Enzymes [BR:
tpsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RGQ13_17175 (rpoA)
Transcription machinery [BR:
tpsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RGQ13_17175 (rpoA)
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RGQ13_17175 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WNC71832
LinkDB
All DBs
Position
complement(4128687..4129676)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPKLVGIENLSDTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKDLAVGLEGKTEAVLTLTKSGEGPVTAADIQHDGD
VTIANPAHVICNLTGDGSISMRIKIEMGRGYVPASIRRNAEEEERAIGRLLVDASFSPVE
RIAYDVDSARVEQRTDLDKLVIDMETNGTLDPEEAIRRASTILAEQLDAFVDLRDVKEVE
PEEVKPAFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaaccgaattccttaagccgaagttggtaggtattgaaaacctatct
gatactcgcgcaaaggtaactttagagccactagaacgtggttttggtcatactttaggt
aacgcactacgtcgtatcctactttcttcaatgccaggttgtgcagtgactgaagtagaa
attgatggtgtattgcatgaatacagtagtaaagaaggtgttcaagaggacatcatcgaa
attctgttaaatcttaaagatttggctgtaggtttagaaggcaaaactgaagcagtttta
actttaactaagtcgggtgaaggccctgtaacggccgctgatatacagcatgatggtgat
gtaacaatcgctaatcctgctcacgtaatctgtaatttaacaggtgacggttctatcagc
atgcgcatcaagatagaaatgggacgtggttacgtgccagcatctattcgtcgcaatgcc
gaggaagaagagcgtgcaattggtcgtttactagttgacgcatctttcagtcctgttgaa
agaattgcttatgacgttgattcagctcgtgttgagcaacgtactgacttagataaacta
gttatcgacatggaaactaacggtacgttagatccagaagaagcgattcgtcgtgcatca
acaattctagctgaacagttagatgcgtttgttgacttacgcgatgttaaagaagttgaa
ccggaagaagttaaacctgctttcgatccaattttacttcgcccagttgatgacctagaa
ctaacagttcgttcagccaactgtctaaaagcagaagcgattcagtacattggtgactta
gtacagcgtgcagaagtagaacttcttaaaacacctaatttaggtaagaagtctctaact
gaaatcaaagacgtgttagcgtctcgtggtctatctctgggcatgcgcctagaaaactgg
ccacctgaaagcattgctgataacgactaa
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