Thalassotalea psychrophila: RGQ13_17540
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Entry
RGQ13_17540 CDS
T10151
Symbol
birA
Name
(GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy00780
Biotin metabolism
tpsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
RGQ13_17540 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpsy03000
]
RGQ13_17540 (birA)
Enzymes [BR:
tpsy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
RGQ13_17540 (birA)
Transcription factors [BR:
tpsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
RGQ13_17540 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
MarR_2
BPL_LplA_LipB_2
HTH_24
HTH_5
Rrf2
HTH_20
GntR
Fe_dep_repress
HTH_36
Mga
Motif
Other DBs
NCBI-ProteinID:
WNC71898
UniProt:
A0ABY9TT00
LinkDB
All DBs
Position
complement(4207737..4208711)
Genome browser
AA seq
324 aa
AA seq
DB search
MAKVVREELIRQLADGQFISGQHLAQQLSVSRTAISKHVKVLTEMGLDIFSVQGKGYKLA
QSITLLDAQTITTQLANLKRKNLVEVHSIIDSTNSYLMRRLPNNVTHGQTCVSEFQSAGR
GRRGKEWVSPFGSHLYLSMYWYLEQGMSAAMGISLVVGIAVSDVLQQQYGLDVQLKWPND
IYINGKKLAGILVELEGQSIGPGNCVIGLGLNINMPKQSADKIDQPWTDLGNELNRDVDR
NILSAQLIAKISERLEQHHQFGLAPMLDDWQRQDFFYNKQVKLLTGDKETRGICKGINSS
GALLLEVDGKQLPIYGGEVSLRGV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtagtacgagaagagctaattcgtcaattagcggatggccaatttatttca
ggccaacacttggcccagcagttaagtgtaagtagaacagctatttcaaaacacgttaaa
gtattaactgaaatgggcctagatatattttctgtgcaaggtaaaggctataaattagcg
caaagcattactctattagacgcgcaaacaattactactcaacttgcaaatcttaaacgc
aaaaaccttgtagaagtgcatagcattatcgattcgactaactcatatttaatgcgccgt
ttaccaaataatgtcactcatggtcaaacttgtgtatcagagtttcaatctgctggaaga
ggtcgcagaggtaaagagtgggtttcaccatttgggtcgcacttatatttatctatgtat
tggtatttagagcagggcatgtctgctgcaatgggaatttctttagtcgtaggtatcgct
gttagcgatgttttgcaacaacagtacggccttgatgtgcaattgaaatggccgaatgat
atttacataaatggtaaaaagcttgctgggatccttgtcgagttagaaggacaaagcatt
ggtccaggaaattgtgtaattggtttaggtttaaatattaatatgccgaaacaaagcgca
gataaaattgatcagccatggaccgatttgggcaatgaattaaaccgagacgttgacagg
aatatcctttctgcgcaattgatcgctaagatcagcgaacgcttagaacaacatcaccag
ttcggtttggcaccaatgttagatgactggcaacgacaagacttcttctataataaacaa
gtgaaattattaacgggtgataaagaaaccagaggaatttgcaaaggtataaatagtagt
ggggctttgttattagaagtcgatggtaaacagctcccaatttatggcggcgaagttagc
ttacgaggtgtttaa
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