Thalassotalea psychrophila: RGQ13_17795
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Entry
RGQ13_17795 CDS
T10151
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGQ13_17795 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpsy03019
]
RGQ13_17795 (recQ)
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_17795 (recQ)
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGQ13_17795 (recQ)
Messenger RNA biogenesis [BR:
tpsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGQ13_17795 (recQ)
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RGQ13_17795 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DNA_pol3_theta
Motif
Other DBs
NCBI-ProteinID:
WNC71948
LinkDB
All DBs
Position
complement(4264578..4266389)
Genome browser
AA seq
603 aa
AA seq
DB search
MKSDASTEQKLPDLHHSLNHHFGYQSFRSGQQQVIEQLLQGRDCLVLMPTGGGKSLCYQL
PATLMPGLTIVVSPLIALMKDQVDGLSRQGISAAYINSSLDGQTINQTMKKVGSGEIKIL
YVAPERLLNHYFLQSIQQVQINFFAIDEAHCISSWGHDFRPSYTQLGKLKEYFPYTPVIA
LTATADVTTRKDILNQLQLNNPYVLLDSFDRPNIRYTLADKYNGETQLIEYLKEMGDESG
IIYCNSRWQVDKLSGFLASKGYNCAGYHAGMETEIRGVIQDGFTKDNIKIVVATVAFGLG
INKPNVRFVVHYDMPRTLESYYQETGRAGRDGLKAEALFLYDSQDIERIKKRISQNENEQ
RINVELQRFAAMSGFAEAQTCRRQVLLNYFAEYTNNGCGNCDICLDPPSRYDATVDAQKV
LSCVFRINQSGDIHYVIDVLRGRELEKITQKEHNKVSTFGIGKDKTRGYWFSVIRQLIHL
GFLQQDIEQQSALCLTNASKSALKGSEPLMMARPRLQSQGYWQQNKATSAYDKVLFKQLR
TLRKVIADSEDIAPFIVFNDASLIEMARLKPRNSTEFLAITGVGDTKLARYGNAFIDLIK
EQS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatctgacgctagtaccgaacaaaaattgccagacttacaccattctttgaaccat
cattttggttatcaaagtttccgctctggtcaacaacaagttatcgagcagttactgcaa
ggtcgagattgtttggtattaatgccaacaggtggtggtaaatcattatgttatcaatta
ccagctactctaatgccgggcttaacaattgtcgtatcgccattaattgctttaatgaaa
gatcaagttgacggtttaagtcgtcaagggatctcagcggcctatattaattcaagttta
gatgggcaaaccatcaaccaaaccatgaaaaaggttggcagtggtgaaataaaaatattg
tatgtagcgccggagcgattgttaaaccattattttttgcaaagcatacagcaagtgcaa
ataaacttttttgccattgatgaagcgcattgcatttcttcatggggtcatgactttaga
ccttcatacacgcaattaggtaagctaaaagagtactttccttatacgccggttattgcg
ttaacagctacggccgatgtgactacccgtaaagatatattaaatcagcttcaactaaat
aatccttatgtgttgctcgacagtttcgatcgaccaaatattcgttataccctagcggac
aaatataatggtgagacacagctcattgaatacttgaaagaaatgggtgatgaaagcgga
attatttattgtaacagtcgctggcaagttgataaattaagcggttttttagcttcaaaa
ggttataactgtgccggttatcatgccggcatggaaactgaaattcgcggtgttattcaa
gatggctttaccaaagacaatatcaaaattgttgtcgctacggtggcgtttggcttaggt
ataaataaacccaatgttcgttttgtggtgcattatgatatgccaagaacgctggagtct
tattatcaagaaacaggccgtgcaggccgcgatggattaaaagctgaagcgctattttta
tatgacagccaagacattgaacgcataaaaaagcgcatatcacaaaatgaaaatgagcag
cgtattaatgttgaattacaacgttttgctgccatgtcaggctttgctgaagcacaaacc
tgcagaagacaagtgttactcaattacttcgctgaatacaccaataatggttgtggtaac
tgtgatatctgtttagatccaccaagtcgatacgacgctacagttgatgcccaaaaagtg
ctgtcgtgtgtatttagaatcaatcaaagtggtgatatccattatgttattgatgtgctt
agagggcgtgaactcgagaaaataacccagaaagaacataataaagtaagtacttttggt
attggtaaagataaaactcgcggttattggttttcagttattagacaattaattcactta
ggctttttacagcaagatatcgaacagcaatcagcactgtgtttaaccaatgcatcaaaa
tccgctctcaaaggttctgagccattaatgatggcaaggccgagactacaaagccaagga
tattggcagcaaaataaagccacctctgcttacgacaaggttttgtttaaacagcttcgt
actttgcgtaaagtaattgccgatagtgaagacattgcaccatttattgtatttaacgat
gcatcattaattgaaatggcccgcttgaagccaagaaactcaacagagttcttagctata
accggtgttggtgataccaagcttgctcgttatggcaatgcgtttattgacttgattaaa
gagcaatcttaa
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