Thalassotalea psychrophila: RGQ13_17810
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Entry
RGQ13_17810 CDS
T10151
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy03420
Nucleotide excision repair
tpsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RGQ13_17810 (uvrD)
03430 Mismatch repair
RGQ13_17810 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpsy03400
]
RGQ13_17810 (uvrD)
Enzymes [BR:
tpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGQ13_17810 (uvrD)
DNA repair and recombination proteins [BR:
tpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RGQ13_17810 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RGQ13_17810 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_22
DUF5906
Motif
Other DBs
NCBI-ProteinID:
WNC71951
UniProt:
A0ABY9TT96
LinkDB
All DBs
Position
complement(4268030..4270201)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSELLDSLNDKQRDAVAAPSKNMLVLAGAGSGKTRVLVHRIAWLVQVEQISPHSILSV
TFTNKAAAEMRGRVEQSIGGNIHGMWVGTFHGLAHRLLRMHFQEAKLPQTFQVLDSDDQL
RMIKRVVRSLQLDEKKWPAKQAMYYINGKKDEGLRPQHIDCQFDPTEQTFVKIYQTYQET
CDRAGLVDFAELLLRAHELWLNNPILLEHYQQRFTRILVDEFQDTNAIQYAWLNMLGKKH
GNVMIVGDDDQSIYGWRGAKIENIQRFVKDFDAETIRLEQNYRSTANILNAANALITNNN
NRLGKDLWTEDDAGETISLYTAFNEIDEARFISGRIKQWLEDGNSLDDVALLYRSNAQSR
LLEEALLQARLPYRIYGGLRFFERQEIKDALAYLRLINNRNDDASFERIINTPTRGIGNK
ALTLIRDCARSQGSTLWDACIYMIEQNELAGRSAKSIKAFVELILQLEDDSTNLNLDQQA
NHVIQHSGLKAMYQAEKGERAAARIENLNELVTACSTYEVDPEVEEELTPLTAFLTHASL
EAGESQADEYESAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQQSAEDIVRLEEERRLCY
VGMTRAMKKLYLTHAESRRLYGQEKYHRQSRFLKEIPDKFIDEIRMKNQVAKPKTTGRFS
NTITMETFENTGFKLGQRVMHQKFGEGVVLNFEGTGAQSRVQVNFEAHGTKWLVVAYARL
EAI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcagaattactcgactctttaaatgataaacaacgtgatgctgttgctgca
ccttctaaaaatatgttggtacttgcaggtgccggctcaggtaaaactcgagtgttggta
catcgcattgcctggcttgtgcaagttgagcaaatttctccacatagtattctttctgta
actttcaccaataaagctgcagcagaaatgcgtggtcgtgttgaacaatctattggcggc
aatattcatggcatgtgggttggtactttccatgggttggcacaccgtttattaagaatg
cattttcaagaagcaaaactgccgcaaacatttcaagtgttagattctgatgatcaatta
cgcatgatcaaacgtgtagttcgatcgctgcaacttgatgagaaaaaatggcctgctaaa
caagctatgtattatatcaatggtaaaaaagatgaaggcttaaggccgcaacatattgat
tgtcagtttgatccaaccgagcaaacttttgtaaaaatttatcaaacctaccaagagact
tgtgatcgtgctggcttggtcgatttcgctgagctgttattacgcgcgcacgaactttgg
ttaaataatccaatattattagagcattaccaacaacgtttcactcgtatactcgtagac
gaatttcaagatactaatgctatccaatatgcttggctaaatatgctcggtaaaaagcac
ggtaacgtgatgattgttggtgatgatgatcagtctatttacggctggcgcggtgcaaaa
attgaaaacattcaacgctttgtgaaagactttgatgctgaaacaattcgcttagaacaa
aattatcgttcaaccgctaatatcctaaatgctgctaatgcgttaattaccaataacaat
aaccgattaggcaaggatttatggactgaagatgatgccggtgaaactatttcgttgtat
accgcatttaatgaaattgatgaagcaaggtttatttcaggtcgcattaagcaatggctt
gaagatggcaattcattagatgatgttgctttactgtatcgctcgaatgcgcaatcgcgc
ttactagaagaagcgttattacaagcacgcttaccgtatcgaatttatggtggtttacgc
ttctttgaacgacaagagattaaagacgcattagcgtacttacgcttaattaataatcgt
aatgacgatgcttcatttgaacgtattatcaatacgccaactcgtggtattggtaataaa
gcgttaacactaattcgagattgtgcaagaagccaaggctctacactctgggatgcttgt
atatatatgattgagcaaaacgagttagcgggtcgaagtgctaagtcaattaaagcgttt
gttgaattaattttacaacttgaagatgattcaactaatttaaatttagaccaacaagct
aatcacgtaattcagcacagtggtttaaaagctatgtatcaagctgaaaagggtgagcgt
gcggcagcaagaatagaaaacttaaatgaattagtcactgcttgttctacctatgaagtt
gacccggaagttgaagaagagctaacgccacttactgcatttttaactcatgcttcgctt
gaagccggagagtcacaagctgacgaatatgagtctgcagtccaattaatgacactgcat
tcagctaaaggcttagaatttccacttgtgttcattgtgggtatggaagaggggatgttc
ccgtcacagcaatctgctgaagacattgttcgcttagaagaagaacgccgtctttgttat
gttggcatgacacgggcaatgaaaaaactgtatttaacccatgctgaatcacgtcgttta
tacgggcaagagaagtatcatcgtcaaagtcgtttcttaaaagaaattccagataagttc
attgacgaaatacggatgaaaaaccaagtggctaaaccgaaaacgactggccggtttagc
aatactattactatggaaacctttgaaaatactggctttaaattagggcagagggtaatg
catcaaaaatttggtgaaggtgtagtattaaactttgaaggcactggtgcacagtcacgt
gttcaagttaattttgaggcgcatgggactaagtggttggttgttgcttacgctagatta
gaggcgatttag
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