Thalassotalea psychrophila: RGQ13_18685
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Entry
RGQ13_18685 CDS
T10151
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGQ13_18685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpsy03000
]
RGQ13_18685
Transcription factors [BR:
tpsy03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RGQ13_18685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
MarR_2
MarR
HTH_IclR
LexA_DNA_bind
HTH_11
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WNC72123
LinkDB
All DBs
Position
4482793..4483500
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AA seq
235 aa
AA seq
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MSLDINKISVKNSLTSCFGTALESINGGDEFLALLANNADEVHIDSHDYLLNEGESADYV
FIPISGSVMLERTASNGARQVYAFLFTGNILGLSTSSIAKYNYSAKALSDLTAIRINRQV
LEEFFKRALDIGKKYHTRTEVVLSAMLDHLFVMGQRTAHQRLAHFLLDMENRLFCHKGQY
NLPMSRQDIADYLGMTVSTACRGFTALKKKGWISISSNSLIIINDRDAMTHYITD
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagatattaataaaatttccgtaaaaaactcgctgacaagttgttttggtact
gctttagagagtattaatggcggtgatgaatttcttgcattattagcaaataatgccgat
gaggttcacattgacagtcacgattacctgttaaatgaaggagagtccgccgactacgtg
tttattccaatttctggctcggtgatgcttgaacgaacagcatcaaacggagctagacaa
gtttatgctttcttatttaccggtaatattttaggtctatcaacatcaagtattgccaaa
tataactacagtgccaaggcattatcagatctgactgcgatcagaattaatcgtcaggta
cttgaagagttcttcaaacgtgcgctcgatattggcaaaaagtatcatactcgtaccgaa
gtagtactttcagcaatgcttgatcatttatttgtgatgggccaacgtactgctcatcaa
cgattagcacattttctacttgatatggaaaaccgtttattttgccataaaggccaatac
aatttaccaatgagtcgccaagacattgccgattacttaggcatgactgtttctacggcc
tgtcgcggctttaccgcgttaaagaaaaaaggctggatcagtatcagcagtaattcatta
attatcattaatgaccgtgatgcaatgacgcattatattactgattaa
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