Thermotoga petrophila RKU-1: Tpet_0071
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Entry
Tpet_0071 CDS
T00525
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpt03016
]
Tpet_0071
Enzymes [BR:
tpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Tpet_0071
Transfer RNA biogenesis [BR:
tpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tpet_0071
Prokaryotic type
Tpet_0071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PUA
TruB_C_2
PUA_3
DKCLD
TruB-C_2
PseudoU_synth_2
GOLD_PATL1_C
Motif
Other DBs
NCBI-ProteinID:
ABQ46100
UniProt:
A5IIS7
LinkDB
All DBs
Position
complement(63953..64882)
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AA seq
309 aa
AA seq
DB search
MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFY
KDLKKVYWVKMRLGLITETFDITGEVVEERECNATEEEIREAIFSFVGEYDQVPPAYSAK
KHKGERLYKLAREGKIINLPPKRVKIFKIWDVNVEGRDVSFRAEVSPGTYIRSLCMDIGY
KLGCGATAVELVRESVGSYTIEESLNVFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTK
TILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRKHERNERVL
TLRKVFNTR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcacggaatccttgtagcctacaaacctaaaggacccacatcgcacgatgttgtg
gacgaagtgagaaaaaaattgaagacgaggaaagtcggacacggtggaactctcgatccg
ttcgcctgtggtgttctcataatcggtgtcaaccaaggtacgagaattcttgagttctac
aaagatttgaaaaaggtgtactgggtgaagatgaggctcggtttgataactgagaccttc
gatataacaggcgaagttgttgaggaacgagaatgcaatgccaccgaagaagaaataaga
gaagcaatcttttcctttgtgggagaatacgaccaggttccgcccgcttattctgccaag
aaacacaaaggcgaacgtctctacaaactggcgagagagggaaagatcataaatcttcct
ccaaagcgagtgaagatcttcaagatatgggatgtgaatgttgaggggagagacgtctct
ttcagagcggaagtgtctcccggcacctacataagatctctctgtatggatataggttac
aagctcggctgtggtgccaccgccgttgagctcgtacgagagagcgtgggatcttataca
attgaggaaagtttgaacgtattcgaagccgctcctgaagagattgaaaacaggatcata
ccactcgaaaaatgccttgagtggctgccgcgtgttgtcgttcatcaggaatcaacgaaa
acgattctcaacggttctcaaatacaccttgagatgctcaaagaatgggacggtttcaaa
aagggggaagttgtcagagtattcaacgaagaaggacggttacttgctctggctgaagcg
gaaagaaattcttcttttctggaaaccttgagaaagcacgaaagaaacgagcgagttttg
actctcagaaaggtctttaacacgaggtga
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