Thermotoga petrophila RKU-1: Tpet_0094
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Entry
Tpet_0094 CDS
T00525
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpt03032
]
Tpet_0094
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_0094
Enzymes [BR:
tpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tpet_0094
DNA replication proteins [BR:
tpt03032
]
Prokaryotic type
DNA Topoisomerases
Tpet_0094
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tpet_0094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
UBA_N4BP1_C
HATPase_c_3
PSK_trans_fac
Motif
Other DBs
NCBI-ProteinID:
ABQ46123
UniProt:
A5IIV0
LinkDB
All DBs
Position
complement(86358..88268)
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AA seq
636 aa
AA seq
DB search
MEKYSAESIKVLKGLEPVRMRPGMYVGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVT
LHEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKISGGLHGVGVSV
VNALSEWLEVRVHRDGKIYRQRYERGKPVTPVEVIGETDKHGTIVRFKPDPLIFSETEFD
PDVLEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIK
RTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEY
GKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREEL
KKIFDANSDLVKAILSKIMSTKQAREAAKRAREMVRRKNVLQNTALPGKLADCSSTHREK
TELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTG
IGDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIK
AGREEFYVYSDQELAEYKEKLQGKRIEIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIE
DAEEADRLFEILMGNDPSSRREFIERHALKVKELDI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtactccgctgaaagtataaaggttttgaaggggctggaacctgtccgaatg
cgacccggaatgtacgtaggatccacaggaaagcgtggattgcatcacctcgtgtacgaa
gtggtggacaacagtgttgacgaggcactggcaggatactgtgactggatacgtgtgact
ctccatgaagatggaagtgtggaagtcgaggataacgggagaggaatacccgttgatata
catcccgaagaaggaagaagcgctctggaagtggttttcacggttcttcatgcaggaggg
aagttttccaaggactcttacaagataagtggcggtttgcatggtgttggtgtatcggtg
gtgaacgctctttcggagtggttggaggtgcgggtgcatcgtgatgggaagatttatcgg
cagcgatatgaaagaggtaaaccggtcacacctgtggaagtaataggagagaccgataag
cacggcacgatcgttcgattcaaacccgaccctctcatattctcagaaacggaattcgat
cctgacgtactggaacacaggttgagagagatagctttcctagtaccaggactcaaaata
gaattcgaagacagaataaacggagagaagaaaaccttcaaattcgacggaggcatagtg
gagtatgtgaagtatttgaaccgtgggaaaaaagctctacacgatgtgatacacataaag
agaacggaaaaagtgaaaacaaaaaatggtgaagacgaagtgatagtggagatcgccttt
caatacactgattcgtattctgaagatatcgtgtcttttgcaaacaccataaaaactgtc
gatggtggaactcatgttacagcctttaagagcaccctcacaagactcatgaacgagtat
gggaaaaaacataattttctcaagaaagacgattccttccagggtgaagatgtgagagaa
ggtctcactgcggttatcagtgtttacgtgaaaaaccccgaatttgaaggacaaacaaag
tcaaaactcggcaacgaagaagtcaaggaagcggtaaccaaggctatgagagaagagctg
aaaaaaatattcgacgcaaattccgatcttgtgaaagctattctttcaaagatcatgagt
accaaacaagcaagagaagcggcaaaaagagctcgagagatggtgaggaggaaaaacgtt
cttcaaaacacagcacttccggggaaactggcggactgcagttccacacatagagagaaa
acggagcttttcatcgtggaaggtgactctgctggtggatctgcaaagcaggccagagac
agagaatttcaagcggttcttcccataagaggaaagattttgaacgtggaaaaatcatcc
ctcgatagattactgaaaaacgagcagatcagtgacataattgttgcagtgggaacgggc
ataggagatgatttcgacgaaagcaagctcagatacggtaggattatcatcatgaccgac
gccgatatagacggtgcacacataagaactctccttctgacactcttctatagatacatg
agacccctcatcgaacagggcagggtatacatagcactcccacctctctacaggatcaaa
gctggaagagaagagttctacgtttacagtgaccaggagctggcggaatacaaagagaaa
ctccagggaaaaaggatcgaaattcaacggtacaaaggacttggtgagatgaatcctgag
cagctctgggaaacaacgatgaatccagaaacgagaaaaatcataagggtaactatagaa
gatgccgaagaagcggatagactctttgaaattctcatgggtaacgatccatccagcaga
agggagttcatagaaaggcacgctctgaaagtgaaagaactggatatctga
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