Thermotoga petrophila RKU-1: Tpet_0245
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Entry
Tpet_0245 CDS
T00525
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tpt
Thermotoga petrophila RKU-1
Pathway
tpt03030
DNA replication
tpt03430
Mismatch repair
tpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tpet_0245
03430 Mismatch repair
Tpet_0245
03440 Homologous recombination
Tpet_0245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpt03032
]
Tpet_0245
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_0245
Enzymes [BR:
tpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tpet_0245
DNA replication proteins [BR:
tpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tpet_0245
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tpet_0245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
RCF1-5-like_lid
DnaX_C
AAA_22
AAA_5
AAA_30
TIP49
AAA_19
PIF1
AAA_assoc_2
DNA_pol3_gamma3
AAA_14
AAA_18
AAA_2
AAA_24
Rad17
Mg_chelatase
AAA_16
nSTAND3
AAA_28
ORC-CDC6-like
TSGP1
TsaE
PGA2
ABC_tran
NPHP3_N
Hda_lid
DNA_pol3_beta
RNA_helicase
AAA_lid_4
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ABQ46274
UniProt:
A5IJA1
LinkDB
All DBs
Position
complement(235367..236803)
Genome browser
AA seq
478 aa
AA seq
DB search
MEVLYRKYRPKTFSEVVNQDHVKKAIIGAIQKNSVAHGYIFAGPRGTGKTTLARILAKSL
NCENRKGVEPCNSCRACREIDEGTFMDVIELDAASNRGIDEIRRIRDAVGYRPMEGKYKV
YIIDEVHMLTKEAFNALLKTLEEPPSHVVFVLATTNLEKVPPTIISRCQVFEFRNIPDEL
IEKRLQEVAEAEGIEIDREALSFIAKRASGGLRDALTMLEQVWKFSEGKIDLETVHRALG
LIPIQVVRDYVNAIFSGDVKRVFTVLDDVYYSGKDYEVLIQEAVEDLVEDLERERGVYQV
SANDIVQVSRQLLNLLREIKFAEEKRLVCKVGSAYIATRFSTANVQENDVREKNDNSNVQ
QKEEKKEMVKAKEEKQEGSEFEKRFKELMEELKEKGDLSIFVALSLSEVEFDGKKVIISF
DSSKAMHYELMKKKLPELENIFSRKLGKKVEVELRLMGKEETIEKVSQKILRLFEQEG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtggaagttctttacaggaagtacagaccaaagactttttctgaggttgtcaatcaggat
catgtgaagaaggcaataatcggtgctattcagaagaacagcgtggcccacggatacata
ttcgccggtccgaggggaacggggaagactactcttgccagaattctcgcaaaatcactg
aactgtgaaaacagaaagggagttgaaccctgcaactcctgcagagcctgcagagagata
gacgagggaactttcatggacgtgatagaactcgacgcggcttccaacagaggaatagac
gagatcagaagaatcagagacgccgttggatacaggccgatggaaggcaaatacaaagtt
tatataatagacgaagttcacatgctcacgaaagaagccttcaacgcgctcctcaaaaca
ctcgaagaacctccctcccacgtcgtgttcgtgctggcaacgacaaaccttgagaaggtt
cctcccacgatcatctcgagatgtcaggttttcgagttcagaaacattcccgacgagctc
atcgaaaagaggctccaggaagttgcggaggctgaaggaatagagatagacagggaagcc
ctgagtttcatcgcaaaaagggcctctggaggattgagagacgcgctcaccatgctcgaa
caggtgtggaagttctcggaaggaaagatagatctcgagacggtacacagagcgctcggg
ttgataccgatacaggttgttcgcgattacgtgaatgctatcttttctggtgatgtgaaa
agggtcttcaccgttctcgacgacgtctattacagcgggaaggactacgaggtgctcatt
caggaagcggtcgaggatctggtcgaagacctggaaagagagagaggggtttaccaggtt
tcagcgaacgatatagttcaggtttcgagacaacttctgaatcttctgagagagataaag
ttcgccgaagaaaaacgactcgtctgtaaagtgggttcggcttacatagcgacgaggttc
tccaccgcaaacgttcaggaaaacgatgtcagagaaaaaaacgataattcaaatgtacag
cagaaagaagagaagaaagaaatggtgaaggcaaaagaagaaaaacaggaaggcagcgag
ttcgagaaacgtttcaaagaactcatggaagaactgaaagaaaagggtgatctttcaatt
ttcgtcgccctcagtctctcagaggtagagtttgacgggaaaaaggtgattatttctttt
gattcatcgaaagctatgcattacgagttgatgaagaaaaagctgcctgagctggaaaac
atcttttccagaaaactcgggaaaaaggtagaagttgaacttcgactgatgggaaaggaa
gaaacaatagagaaggtttctcagaaaatcctgagattgtttgaacaggagggataa
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