Thermotoga petrophila RKU-1: Tpet_0658
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Entry
Tpet_0658 CDS
T00525
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpt03032
]
Tpet_0658
03036 Chromosome and associated proteins [BR:
tpt03036
]
Tpet_0658
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_0658
DNA replication proteins [BR:
tpt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Tpet_0658
Chromosome and associated proteins [BR:
tpt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Tpet_0658
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Tpet_0658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
DUF2267
DUF937
DUF6934
Motif
Other DBs
NCBI-ProteinID:
ABQ46678
UniProt:
A5IKF5
LinkDB
All DBs
Position
complement(666175..666447)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKKELIDRVAKKAGAKKKDVRVILDTILETISEALAKGEKVQIVGFGSFEVRKAAARKG
VNPQTRKPITIPERKVPKFKPGKALKEKVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaggaactcatcgacagggtggcgaagaaagcaggtgcgaagaagaaggat
gtaagagtgattctcgacaccattcttgaaacgatctcagaagctctcgcaaaaggggaa
aaggttcagatcgttgggttcggaagctttgaggtgagaaaggctgctgcaagaaaaggc
gtgaatcctcagacaagaaaacccatcaccattcccgaaagaaaggttccgaagttcaaa
cccggaaaagctctcaaagagaaggtcaagtga
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