Thermotoga petrophila RKU-1: Tpet_0665
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Entry
Tpet_0665 CDS
T00525
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
tpt
Thermotoga petrophila RKU-1
Pathway
tpt00470
D-Amino acid metabolism
tpt00550
Peptidoglycan biosynthesis
tpt01100
Metabolic pathways
tpt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Tpet_0665
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Tpet_0665
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Tpet_0665
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpt01011
]
Tpet_0665
Enzymes [BR:
tpt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Tpet_0665
Peptidoglycan biosynthesis and degradation proteins [BR:
tpt01011
]
Precursor biosynthesis
Amino acid ligase
Tpet_0665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
ATP-grasp
RimK
GARS_A
Glutaredoxin
Motif
Other DBs
NCBI-ProteinID:
ABQ46685
UniProt:
A5IKG2
LinkDB
All DBs
Position
complement(673868..674779)
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AA seq
303 aa
AA seq
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MRVALLMGGVSREREISLRSGERVKKALEKLGYEYTVFDVKEDFLKEVDQLKSFDVVFNV
LHGTFGEDGTLQAILDFLGIRYTGSDAFSSMICFDKLATYRFLKDIVEIPDFIEIREFME
TSPLGYPCVVKPRREGSSIGVFICESDEEFQHALKEDLPRYGSVIVQKYIPGREMTVSIL
ETEKGFEVLPILELRPKRRFYDYVAKYTKGETEFILPAPLNPSEERLVKETALKAFVEAG
CRGFGRVDGIFSNGRFYFLEINTVPGLTETSDLPASAKAGGIEFEELVEIILKSAFLKGE
VRA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgagagtggctctcctgatgggaggagtatcaagggaaagagaaatctccctgagaagc
ggagaaagggtaaaaaaagctcttgaaaaacttgggtatgaatacaccgtttttgatgtt
aaagaggattttctcaaagaagtggatcagttaaaaagttttgatgtggtcttcaatgtt
ctccatggaacttttggtgaggatggaacgcttcaagcaattctggattttttgggaatt
agatacaccgggtccgatgcgttttcaagtatgatttgctttgataaactagcaacttac
aggtttttaaaagacatcgtcgagatacctgatttcatagagatcagggaattcatggaa
acttctcccctcgggtatccctgtgtggtaaaaccgaggagggagggttcaagtatagga
gtgttcatttgtgaatcggatgaagagtttcaacacgcgctcaaagaagatttaccacga
tatgggagtgtgattgttcaaaagtacatccctggcagggagatgaccgtgtctatttta
gagacagaaaaaggtttcgaggtccttcccattcttgagttgcgaccgaagcgtcggttc
tacgactacgttgcgaagtacacgaaaggtgaaactgagtttattcttcctgctcctttg
aatccttcggaagaacgactcgtcaaggaaacagccctcaaagcatttgtggaagctggt
tgcagaggttttggaagagtggatggtattttcagcaatggtaggttctactttctggaa
atcaacacagtgccaggtttaacagaaaccagtgatcttccagcaagtgcgaaagcgggg
gggatcgagttcgaggaactcgttgaaatcatcttaaaaagcgcctttttgaagggagag
gtgagagcatga
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