Thermotoga petrophila RKU-1: Tpet_0666
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Entry
Tpet_0666 CDS
T00525
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpt03032
]
Tpet_0666
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_0666
Enzymes [BR:
tpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tpet_0666
DNA replication proteins [BR:
tpt03032
]
Prokaryotic type
DNA Topoisomerases
Tpet_0666
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tpet_0666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ABQ46686
UniProt:
A5IKG3
LinkDB
All DBs
Position
complement(674694..676595)
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AA seq
633 aa
AA seq
DB search
MNRKVKKYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGIDLEKDFEPEFVVI
KGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTLGKKNRIVFSEITPRVIR
EAVKNPREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKTNLSAGRVQSATLKLVCDRE
REILRFVPKKYHKITVKFDGLTAEIDVKEKKFFDSETLKEIKSIDELVVEEKEVSLKNFS
PPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYA
KDEARNLITEVFGEDYVGAKGAKRKGNTKIQDAHEAIRPTNVFMTPEEAGKYLNPDQKKL
YELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWTTERNTGEFP
FEEGESVKPVVVEIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKK
IRGYLYPTVVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLQEFYQSFS
SVFDRNDRIVIDFPTNQKCSCGKEMRLSFGKYGFYLKCECGSTRSVRNDEIAVIDDGKIF
LGRKDSESGSPDGRSIKGKRNLPEKRRKGKKSS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaaagtgaagaaatacatcgtcgttgagtctcctgccaaggcgaagacgatc
aagagtattcttggaaacgaatacgaagtcttcgcttcgatgggtcatatcatagatctt
cccaaaagtaaatttgggatagatctggaaaaggatttcgaaccggaattcgtggtaata
aaagggaaagaaaaagtggtcgaaaagctgaaagatcttgcaaaaaagggagaactgctc
atcgcttctgatatggatagggaaggagaagctatagcctggcacatagccagagtgacg
aacactcttgggaagaagaacagaattgtgttctctgagatcactcctcgcgtgataaga
gaagccgttaaaaatcctcgagaaattgacatgaagaaagttcgagcacagcttgcaagg
agaattctggataggatcgttggttattctctgagtccggtactctggagaaattttaaa
accaacctgagcgctggcagggtccaatcggctacactgaagctcgtttgtgatagagag
agagaaatcctcaggtttgtaccaaagaagtaccacaagatcaccgtcaaattcgatggt
ctcacggcagaaatagatgtgaaagaaaagaagtttttcgactctgaaacgttgaaagag
atcaagagtatagacgaactcgtcgtagaggagaaagaggtttctttgaaaaacttttca
cctccagaacccttcaaaaccagtaccctccagcaggaggcgtattccaaactgggtttc
tccgtttccaaaaccatgatgatcgcccagcagttgtatgaaggtgtagaaacgaaagat
gggcatatcgcgttcataacctatatgagaacagattcaacgcgtgtatcggattacgcg
aaagatgaagccaggaatctgataacagaagtctttggagaggattatgttggtgcgaaa
ggagcaaagagaaaaggcaacacaaaaatacaggatgcgcacgaagcgattcgtcccacg
aacgttttcatgacacccgaggaagcggggaaatacctgaatcctgaccagaaaaaactc
tacgagttgatatggaagagatttctcgcttctcagatgaagccttctcaatacgaagaa
actcgctttgtcctgagaacaaaagacggaaagtacagattcaaaggaacggtgttgaaa
aagattttcgatggatacgaaaaggtgtggacgacggaaagaaacacaggggagtttcct
ttcgaagaaggagaatctgtgaaaccggtggttgtagaaatagaagaacaggaaaccaaa
ccaaaaccaaggtacactgaaggttcactcgtgaaggaaatggaaaggcttggtataggt
cgtcccagcacctacgcatccacgataaagctcctgttgaataggggttacataaagaag
atcagaggttatctctatcctactgtcgttggaagtgttgtcatggattatctggagaaa
aagtactccgacgttgttagcgtttctttcacggctgagatggagaaggatctcgatgaa
gtcgaacagggcaagaagacagacaagatcgtcttgcaagagttttatcaatccttttcc
agtgtgttcgataggaacgacaggattgtgatcgattttccaacgaaccagaaatgttcg
tgtggaaaagaaatgagactctcttttgggaaatacggcttctatttgaaatgtgagtgt
ggtagcaccagaagcgtgagaaacgatgaaattgcagtcatagacgatggaaaaatattc
ctggggaggaaagacagtgagagtggctctcctgatgggaggagtatcaagggaaagaga
aatctccctgagaagcggagaaagggtaaaaaaagctcttga
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