Thermotoga petrophila RKU-1: Tpet_0747
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Entry
Tpet_0747 CDS
T00525
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tpt
Thermotoga petrophila RKU-1
Pathway
tpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tpet_0747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_0747
Enzymes [BR:
tpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tpet_0747
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tpet_0747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
PriA_3primeBD
Zn_ribbon_6
DUF1272
Nop10p
Motif
Other DBs
NCBI-ProteinID:
ABQ46766
UniProt:
A5IKP3
LinkDB
All DBs
Position
complement(755472..757682)
Genome browser
AA seq
736 aa
AA seq
DB search
MYYKVAVSGSGKVLNVFSSEELLTGERVWLKWRNEKVKGYVLERSFSHENEATLSERDGK
SFLSEGHVKIAEWVSERFFSPVGMVFDLFFPQGIDDYKEEVVVSESPFLDFDRMTLRDFL
ETFGEKALKEMVKKGLVRVEKNFYVKEPRPRVKKRLFLKKGISEIVREHLTVKQRMVVEY
LQFNDGVPLEELLEDLEVSKSVIETLQRKNIVEIVSGDVLPKKRRILRGDFKGNISKENL
FFGPTGSGKTEALFELIDVYSRKGTVLFLVPEVSVLTHTLSRLKGAFPDLKIGIYHSYLS
RARKNLEWYRAVSGKIDVLLGTRSAVFVPVKNLSLLIVDEEHDESFYQHTRPSYDAIVVA
RKISEVFDVPIILSSATPDLWTYREAKEGRIRTFNFTRRFGSLSVEVVDMRNEEKIGSFA
KKTLDRIEETLEEGKRVLIYVRRKGFWGRVQCEVCGYVLKCENCDVSLVYHSDTHSLKCH
QCGREYGLVESCPRCGGRLVGRTAGTERVERELKRYFPTRRIARVDREVVDNIMELESYI
DKLIRGEIDILVGTRLITKSLSVPEIGLVCIMDVDSLIFNPDYSSSLRTFQLVVQALGRA
SRGDQGKAIIQTYNPEDTIIRKALEEDVNGFYAEELERRKALGYPPYRHLIQVAVKSKNP
EVGKNSLTSLKEFLKGEEVLGPVEHWVFKLRGFYRHHLIVKTEDLERVLPKLEKALRILG
IDAIVRVDPPTLEVSD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtactacaaggtggctgtctccggttcgggaaaagtgcttaatgttttctcttcagaa
gagcttttgactggtgaaagagtgtggttgaagtggcgaaatgaaaaagtcaagggctac
gtactggaacgatcattttcacacgaaaacgaagcaacgctcagtgaaagggacggtaaa
agttttctaagcgaaggacatgtgaaaatagcagaatgggtgtctgaaaggtttttctca
cctgtaggaatggttttcgatctgtttttcccacagggtatcgacgattacaaggaggaa
gtggttgtttcggagagtccgtttctggatttcgacaggatgactctgcgcgattttctt
gaaactttcggggaaaaagctctgaaagaaatggtgaaaaaaggcctggtgagggtggag
aaaaatttctatgtgaaagagccaagacctcgtgtgaaaaaacgattgtttctgaaaaag
ggaataagtgaaatcgttcgagaacatctaactgtgaagcagagaatggtggtggaatac
cttcaattcaacgatggggtccctcttgaggagctgctggaggatctggaggtttcaaag
agtgtgattgaaactcttcaaaggaagaatatagtagaaatagtgagtggtgacgttctt
ccaaaaaagagaaggatccttcgcggtgatttcaaaggaaatatctcgaaggaaaatctt
ttttttggtcctactggaagtggaaaaaccgaggctttgttcgagttgatcgatgtgtat
tcgaggaaaggaactgtgcttttcctcgtaccggaagtttctgttctcacccacacgctt
tcacgtctgaagggagccttcccggacttgaaaatagggatttatcacagctacctttcc
agagcgaggaaaaatctggaatggtacagggcggttagcggaaaaatcgatgtgcttttg
ggaacacgcagtgctgtttttgttccagttaagaatctttccctcttgatagtcgacgaa
gaacacgatgagagtttttatcaacacactcgaccttcttacgatgccatcgtggttgca
aggaaaatctctgaagttttcgatgttcccataattctgtcttctgcaacaccggatttg
tggacctacagagaggcaaaagagggtcgcatcaggacgttcaattttacgagaaggttc
gggagtttgtctgtggaagttgtcgatatgcgaaatgaagagaagataggaagttttgcg
aaaaagacccttgacagaatagaggagaccctcgaggaaggcaagagagttctcatctac
gtaaggagaaaaggtttctggggtcgtgtccagtgtgaagtgtgtgggtacgtgctcaaa
tgtgagaattgtgatgtgtctctggtgtaccattcagatacgcattccttgaaatgtcat
caatgtgggcgtgagtacggattggttgaatcctgtcctcgctgtggagggcgtctcgtc
ggaagaacagcgggaacagaaagagtggaaagggaactgaaaaggtactttccgactcgc
aggatagcgagagtcgatagagaggttgtcgataacatcatggagctggaaagttacata
gacaaattgatcagaggcgagatagatatactcgttggaaccaggttgatcacaaagagt
ctcagtgtacccgaaataggtctcgtatgtatcatggatgtggattctttgatcttcaac
cctgattattcgtcttcgcttcgtacgtttcagttggtcgttcaggcacttgggagagca
tcaagaggagatcaggggaaggcgattatccagacttacaacccggaggacacgatcatc
agaaaagctctggaagaagatgtgaacggtttttatgccgaggaactcgaaagaagaaaa
gcccttggttatcctccatatcgtcacctcattcaggttgctgtgaagtccaagaatccg
gaagttggaaagaattctctgacttctctaaaagaatttctgaaaggcgaggaggttctt
ggacccgttgagcactgggttttcaaactgagaggattctacaggcaccatctcattgtg
aaaacagaagacttggagagagtacttccaaaactggaaaaagcgttgagaatactggga
atcgatgcgattgttcgggtcgatccacccacgctcgaggtatcagattaa
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