Thermotoga petrophila RKU-1: Tpet_0937
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Entry
Tpet_0937 CDS
T00525
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpt03016
]
Tpet_0937
Enzymes [BR:
tpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Tpet_0937
Transfer RNA biogenesis [BR:
tpt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Tpet_0937
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Dynein_heavy
SBDS_domain_II
Corona_NS2A
DUF7234
Motif
Other DBs
NCBI-ProteinID:
ABQ46955
UniProt:
A5IL82
LinkDB
All DBs
Position
958716..959279
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AA seq
187 aa
AA seq
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MRTFIAIDVNEEVKKQASEIIEKLMRRGFGATWVSEENMHLTLFFLGEVDEQKISEIAEH
LCRRVRGFPSFSFTVKGFGYFKRKMSPRVFWLGVENTDRLMKLYEELRNELSHHGFSFEE
KFVPHITIGRVKYYPDKWEKLIEDIDFPPIEVAVDRFKIYSSTLTPTGPIYRVLYECQFE
GGLIRYV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccttcattgctatcgatgttaacgaagaagtcaagaagcaagcttctgaaatc
atagaaaaactcatgagaagaggttttggtgcaacgtgggtttctgaagaaaacatgcac
ctcacactttttttcctgggggaggttgacgaacaaaaaatctctgaaatagccgaacac
ctctgtagaagggtgagaggttttccttctttttcgttcaccgtgaagggttttgggtac
ttcaaaaggaagatgtctccgcgcgtcttctggctcggagtggagaacactgatcgcctg
atgaaactctacgaagagctcagaaacgagctgtctcaccacggtttttcgtttgaagag
aagttcgtccctcacattacgattggaagggtgaagtactacccggacaaatgggaaaaa
ctgatcgaagacatcgattttccacccatcgaagttgctgtggacagattcaagatttac
tcgtccacgttaacaccgacgggtcccatctacagagttctttacgaatgccagtttgaa
ggaggattgatcaggtatgtctga
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