Thermotoga petrophila RKU-1: Tpet_0958
Help
Entry
Tpet_0958 CDS
T00525
Name
(GenBank) WD-40 repeat protein
Organism
tpt
Thermotoga petrophila RKU-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
WD40_like
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
PQQ_2
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
BBS2_Mid
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_SPT8
B-prop_COPA_B_2nd
Beta-prop_RIG_1st
Beta-prop_WDR19_2nd
Gmad1
Motif
Other DBs
NCBI-ProteinID:
ABQ46976
UniProt:
A5ILA3
LinkDB
All DBs
Position
complement(986523..988265)
Genome browser
AA seq
580 aa
AA seq
DB search
MKKSLTLFLVLISILIFSQTLKLEKVLGFSDISSLTIKDGYLLLGTGNGEIIVYKGGSYY
KVFKVHDNRVNEVTFENGFIVSASDDKTVGVTNLETGETHLLKGHVKGVSSVAVTGNKIL
SASFDGTVRVWSFPDGKEISSQRLGPSVVKIAAHENRYVMGLANGLALISDISNPSFSIP
LKAHPEGIKKIVFSENGQLIATCGGNTVKVWNASNGRLVLQYDHVITVNDVAFLDNDNLI
FVTDDYKAVVLNIQKNEVVKSIDAHNNFVLFVSSDDGSIATYGMDKTVKVWNADLELQYS
LYGHQLSVNTVALSSDGKFIVSGSDDREILIWNAEKGIAEHRIKALSGVRKLLTVENNII
SCLDSNQLKIYNLENGKLVKRIKVGTTSTMDIALQNDRMAIGFYDGSVALFRYPTFEEIW
RKDTEHEMIQTIDMNNKFIAFGVSYSDPKDKIGYVEVLSADTGERVLLLEGHRGNVNAVK
FAGDFLVSGGEDGKVILWSLDTGSKVREIYLNEPVSSLLIDEKELFVGTWNGNIKIFAFP
DLTLKTSLKASDQKIGHFIKVGDQLVVPCGDGKIRILLEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcactgacactgtttttggttctcatatcgatcctgattttctctcaaacg
ctcaaactcgaaaaggtgctgggattcagcgatatttcatctttaacgatcaaagatggt
tatctcttacttggaacgggaaacggtgaaatcatcgtttacaaaggtggatcctattac
aaggtcttcaaagtccacgacaacagagtaaacgaagtgacttttgagaacggttttatc
gtgagcgcttcagacgacaaaacagttggtgtaacgaacctggagacaggtgaaacacat
cttctcaaaggtcacgtgaaaggtgtctcttctgttgctgtgacgggcaataaaatcctg
agcgcttctttcgatggaacggtgagagtatggtctttcccagatggaaaagaaatttct
tctcaaagacttggaccatcggttgttaaaatcgccgcccatgagaatagatatgtcatg
gggctggccaacggacttgcactgatcagcgacatctcgaatccctcattttccattccc
ctcaaggcccatcccgagggaatcaaaaagatcgtgttctcagagaatggacagttgatc
gcaacctgtggaggaaacaccgtaaaggtatggaacgcttcgaatggaagactcgttctc
cagtacgaccacgtcataacggtgaatgatgtggcttttcttgacaatgacaatctcatt
tttgtaaccgacgattacaaagccgtggttttgaacattcagaaaaacgaagtggtgaaa
tcaatcgacgctcataacaacttcgttcttttcgtctcttcagatgacggtagcatagca
acctacggaatggacaaaactgtcaaagtgtggaatgccgatctggagcttcagtactct
ctctacggtcaccaactctcggtgaacacagtagctttatcaagcgacgggaaattcatc
gtgagcggcagtgacgatagagaaattctgatatggaacgctgagaaggggatcgctgaa
cacaggataaaggctctatcaggggtcagaaagcttttgacagtagaaaacaacatcatt
tcctgtcttgatagcaatcaactcaagatttataacctggaaaatggaaagctcgtgaag
agaatcaaagttggcacgacgagcacaatggacatcgctcttcaaaacgatagaatggca
ataggattctacgacggaagtgtcgctctgttcagatatccaaccttcgaagagatatgg
agaaaagacacagaacacgaaatgatccaaacgattgatatgaacaacaaattcatcgcc
ttcggagtttcttactctgatccaaaagacaagataggttacgtagaagttctctccgca
gacacaggggaaagagtacttctgctggaaggtcacagaggaaacgtaaacgctgtgaaa
ttcgctggggactttcttgtctcaggtggagaagacggaaaggtcattctctggagcttg
gatacaggttcaaaagtccgcgagatctacctgaacgaaccagtgtcctctctattaatc
gatgaaaaggaactctttgttggaacctggaatggaaatatcaaaatttttgcttttcca
gatctgaccttgaagacttctttgaaagcctctgatcaaaagataggacatttcataaag
gtgggcgatcagctcgtagttccatgcggtgatggaaagataaggatcctcttggaaaag
tga
DBGET
integrated database retrieval system