KEGG   Thermotoga petrophila RKU-1: Tpet_1084
Entry
Tpet_1084         CDS       T00525                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
tpt  Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:tpt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tpt02048]
    Tpet_1084
Enzymes [BR:tpt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Tpet_1084
Prokaryotic defense system [BR:tpt02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Tpet_1084
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C HD Cas3_HD ResIII PH_38
Other DBs
NCBI-ProteinID: ABQ47098
UniProt: A5ILM5
LinkDB
Position
complement(1112028..1114319)
AA seq 763 aa
MSKILAKSNGVTLREHVLDLLEVLENLQIDSGVRELAGKAILYHDLGKVIYAFQKKVGGD
VPEDGIPDIPHSFLSIAFIPENTLRELGEGLSRIFLSAVLYHHWRETYLDYLFGRKKESV
CKAYERLLEVGDEIVWLLREEMGDLCEIELNKPLCEYLSHNSIIDSGLVFPPHLISLLPS
IILKELNIRDENYKRYIITSGTVMRADRFASYVETAGNKELLKKADKRLERDQLETVRRY
LERISNKVWQLDLLKDCRGENIVLVAPTGAGKTEFALMWSKGKTLFTLPLQSATNMMYER
VKNYFGEENVGLLHSDAAVYLFFSSFLKNNFEDREGEVLQIVEQSRFFSHPFVISTGDQV
FPSALKYPGYEMIYSILANSYLVIDEIQAYSPEAAAIIVKTAEDVKQLGGHFLIMTATLP
GFIRDEILKRAELEEKNIKDVYEDIPQGRLLRNLVKVEKSLDPVEKAVEFFKKGCRVLIV
RNTVRNAIETYRQLVEKLGKEDVLLIHSRMTLEDRRRIEEILESYRPGAKGRNIILVSTQ
VVEASMDIDFDILLTDIAPADSLVQRMGRIFRKREWTEEFPNTFIYADSNEKKRKELIAG
VYSEDVVSATLNALEGMFDIEKPFKLDELSKRKWVEETYQALSQGSNYLKKFRETLDVLD
SGYSSEKKHEAHRIFRRVVSMSIVPENLKEDLKRELKSVSDYFDFRRVTAKYLVDVPLHH
IKSGALEPLEVESENEQVLKWASALYVLKGSRYEKGLGIFLEE
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgtccaaaattcttgccaagagcaacggtgttactctcagagagcacgtactggattta
ttggaagtactggagaatcttcagatagattctggagtaagagaacttgctgggaaagct
atcctttatcatgatttgggtaaagtaatatacgcgtttcaaaaaaaagttggaggagat
gtcccggaagatggtattcccgacattccgcacagctttctgagtatagcatttatcccg
gagaatactctcagagaactcggtgaaggactttctcgcatttttctttcagcggttctt
taccatcattggcgagaaacctatcttgactatctgtttggaagaaaaaaagaaagtgtt
tgtaaagcttacgaaagacttcttgaagtaggtgatgagatagtttggcttctcagagaa
gaaatgggagatctctgtgaaattgaattgaacaaaccgctgtgtgaatacttatcacat
aactcgataattgacagtggcttagtattccctcctcatttgatttctctgcttccgagt
atcatccttaaagaactgaatataagagatgaaaattacaagcgttacataatcacctct
gggacagtcatgcgagccgatagattcgcatcttacgtggaaacggctggaaataaggag
cttctcaagaaagcagataaaagactggaaagagatcagcttgagactgttcgaagatat
ctggagagaatatccaacaaagtatggcaactggatcttctgaaagattgtcgaggagaa
aatattgtacttgtggcgccgaccggagccggaaagacagaatttgccctgatgtggagc
aaaggaaaaaccttgttcactcttcctcttcagagcgcaacgaacatgatgtacgaaaga
gttaagaattattttggtgaagaaaacgtcggtcttctacattccgatgctgctgtttat
ctgtttttctccagttttctgaaaaacaactttgaggacagagaaggagaagtgcttcag
atagtggaacaatcaagattcttttctcatcctttcgtaatatcgacgggggatcaagtc
tttccttctgctttgaaatatccgggatacgagatgatctattcaatcctggctaattcc
tatcttgtgatagacgaaatacaggcctattctcccgaagctgcagcgataattgtcaag
acagctgaggatgtgaaacaactcggaggacattttttgataatgacagctacactgcct
ggattcatcagggatgagatcttaaaaagagccgagctagaggaaaagaatataaaagat
gtttacgaagacattcctcagggaagattactacggaatttggttaaagttgaaaaaagc
ttggatcccgtggaaaaagctgttgaatttttcaaaaaaggatgtagggttttgatagta
agaaacacagtgcggaatgcgattgaaacttatcggcaacttgtagagaaactgggaaaa
gaggatgttctactgatacattcccggatgactctggaggatcgaagaagaatagaggag
attttggaaagttaccgcccaggagcgaagggaagaaacattattctcgtatcaacacag
gttgtggaggcttcaatggacattgattttgatattctgcttacagatatagcaccagcg
gattctctggtgcagaggatgggaagaatcttcagaaaaagggagtggactgaagaattt
ccgaatactttcatatacgctgatagcaatgagaaaaagcgaaaggagcttatcgccggg
gtttacagtgaagatgttgtatctgcaactttgaacgcgttagaaggcatgtttgacata
gaaaaaccatttaagctggatgagctatcaaaaagaaaatgggtggaagagacctatcag
gcactttctcaaggaagcaactatttaaagaaatttcgggagactcttgatgttctcgat
agcggttattcctcagaaaagaagcatgaagcccacaggattttcagaagggtagtatcc
atgagcattgttccggaaaatttgaaagaagatcttaagcgggagctgaagagtgtatcg
gattactttgacttcaggcgagttactgcaaaatatcttgttgatgttccgctccaccac
ataaaaagtggagctttagagcctttggaggtagaatccgagaatgaacaagtattgaaa
tgggcaagcgcgctttatgtgttgaagggtagcaggtacgaaaaaggtctgggaattttc
ctggaggaatga

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