Thermotoga petrophila RKU-1: Tpet_1155
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Entry
Tpet_1155 CDS
T00525
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_1155
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tpet_1155
Archaeal homologous recombinant proteins
Tpet_1155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_15
AAA_21
AAA_27
AAA_29
Seryl_tRNA_N
ABC_tran
BRE1
DUF6364
ATG17_like
MukB
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ABQ47169
UniProt:
A5ILU6
LinkDB
All DBs
Position
complement(1178328..1180886)
Genome browser
AA seq
852 aa
AA seq
DB search
MRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDY
VNKNATDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPASVK
QEVEKILGIEHRTFIRTVFLPQGEIDKLLTSPPSEITEIISDVFQSKETLEKLEKLLKEK
MKKLENEISSLQALYAASWKYLEENDLEVLKSELKTVSEKKKELLKKREELQKEEEQLKR
LLEKYRELVKKKERLKALSLRKNELQKEVVHEQKVKKAKELEPLFRELYLRQREFERLSQ
DLNSREERYKELEKKKEAISKEIPVHRERLSKLEEMAEKINEELDLLEKVLKASRPLLEQ
RIRLKENLIRLEEEIRRLVGEKEKRKKELFSIEKTENETKDELEKLLEELSVLKKDHMKW
LAYQIASSLNEGDTCPVCGGVFHGKVEAVEFNVDELEKLDQKRSELENTLNVLKERKKSL
SSLIEDLLMKTEEGKKNLKSIRNQIEKIEEELHRLGYSEDLEEKLDEKRKKLRKIEEERH
SISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEMDQLKRDFFDRLGEIGIGFE
EFRILVKEEVKDAEKELGIVETEIRLLEGSLKELESENVRDVSEDYERVRNQLEALSQEI
SDLERKEGRLNHLIEETLRRERELKSLEKKLKELSDEYNNLDLLRKYLFDKSNFSRYFTG
RVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLA
MSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDR
KLRIMGGVVVNE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcctgaaagactcaccgttagaaactttcttggactgaaaaatgtcgatatagag
ttccagagcggaataacggttgtagagggtccgaacggtgccggaaagtcgtccctcttc
gaagccatttcttttgcacttttcgggaacgggataaggtatcccaactcgtacgattac
gtgaacaagaacgccaccgatggaactgcccgtctcgtgtttcaattcgaacgtggaggg
aaaagatacgaaatcataagagagataaatgccctgcagagaaaacacaacgcgaagctc
tccgagatactggaaaacggaaagaaagcggccatagcagcaaaacctgccagcgttaag
caggaagtggaaaaaattctgggaatagaacacagaaccttcataagaacggttttcctc
ccacagggagaaatagacaagcttttgacttctcctccatcggagatcaccgagatcatc
tccgatgttttccaaagcaaagaaacactcgaaaagctggaaaaactcctcaaagagaag
atgaaaaagttggagaacgagatatcctccctgcaagctctctacgccgccagctggaag
tatctggaagagaacgatctggaagttctgaagagcgagctgaaaaccgtctcggagaaa
aagaaagaacttctcaaaaaaagagaagaactccagaaggaagaagagcagctcaagagg
ctccttgaaaaatatcgggaactcgtgaaaaagaaagagaggctcaaggcgctctctctg
agaaagaacgaattgcaaaaagaagtggtccacgagcagaaggtgaaaaaagcgaaggaa
ctggaaccgctctttcgagaactctacctcagacagagggaatttgagaggctctcacag
gatttgaacagcagggaagagagatacaaagaactcgaaaagaaaaaggaagcgatctca
aaagaaatccctgttcacagggaaagactttccaagctggaggagatggcagaaaagatc
aacgaagaactggatcttcttgaaaaggtcttgaaggcctctcggccgcttcttgagcaa
agaataagattgaaagaaaatctcataaggctcgaggaagagatcagaagactcgtcgga
gaaaaagaaaagaggaaaaaagagctgttttcgattgaaaagacagagaatgaaacgaag
gatgagctggaaaaactgctcgaagaactctcagttttgaagaaagaccacatgaaatgg
ctggcctatcagatagcttccagtctgaacgaaggtgacacctgccctgtatgcggtgga
gtgttccatggaaaagtggaagccgtcgaattcaatgtcgatgaacttgagaagctcgat
caaaaaagaagcgaactggaaaacaccttgaacgttctgaaagagagaaagaaaagcctt
tccagcctcatagaagatcttctgatgaaaaccgaagaggggaagaaaaatctgaagagc
attcgaaatcagattgaaaaaattgaagaagaactgcacagattgggttattcggaagat
ctggaggaaaaactggatgaaaaaagaaaaaagcttagaaaaatagaagaagagaggcat
tctatttcccagaagatcacagcggccgacgttcagatttcgcagatcgaaaaccagctg
aaagaaataaaaggagagatcgaagccaaaagggaaactctgaaagaacagcgcgaagag
atggaccagttgaaaagagatttcttcgatcgtttaggggagataggaatcggctttgaa
gagttcaggatcctcgtcaaagaggaagtaaaggacgcggaaaaagaattgggaattgta
gagacggagatcaggcttcttgagggaagcctaaaggagctcgaatcagagaatgttcga
gatgtgagtgaagattacgaaagggttcgaaatcaactggaagctctctcacaggaaata
tcggatcttgagagaaaagaaggacggctcaatcatctcatcgaagaaacactcagaaga
gagcgagagttgaagagtctggagaagaagctgaaagagctgagcgatgaatacaacaat
ctggatcttctgaggaaatatctgttcgataaaagtaacttctcaagatacttcacaggg
agagttctcgaagcggtcctgaaaagaacgaaggcatatctcgacattctgacgaacgga
aggttcgacatagattttgacgacgaaaaaggtggtttcatcataaaagattggggcatc
gaaagaccagcgaggggactttccggtggagaaagagctctcatttccatatctcttgcc
atgtcccttgcagaggtagcctccggcaggctggacgcgttcttcatcgatgaagggttt
tccagtctcgacacggagaacaaagagaagatcgcttccgttttgaaggaactcgaaaga
ttgaacaaggtgatcgttttcatcacgcacgacagggagttctcggaggctttcgacagg
aagctgagaataatgggaggagttgtggtgaatgagtga
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