Thermotoga petrophila RKU-1: Tpet_1156
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Entry
Tpet_1156 CDS
T00525
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_1156
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tpet_1156
Archaeal homologous recombinant proteins
Tpet_1156
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_acc_DNA_cap
Mre11_C_bact
Metallophos
Metallophos_2
SbcD_C
BrxB
Csm2_III-A
Usp
AAA_23
Synaptonemal_3
Motif
Other DBs
NCBI-ProteinID:
ABQ47170
UniProt:
A5ILU7
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All DBs
Position
complement(1180876..1182024)
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AA seq
382 aa
AA seq
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MKELRILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKRGVDLILLTGDLLHSR
NNPSVVALHDLLDYLKRMMRTAPVVVLPGNHDWKGLKLFGNFITSISSDITFVMSFEPVD
VEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTV
EGLSGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIKIDFGEE
ADEKGAVFVELKRGEPPRYERIDVAPLPLKTLYYKKIDTSALRSIRDFCRNFPGYVRVVY
EEDSGILPDLMGEIDNLVKIERKSKREIEEVLRESMEEFKEELDKIDYFELFKEYLKKRE
ENHEKLLKILDELLDEVKKSEA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggagctcagaatactccacacgtccgactggcacctcggtgtcacctcgtggacc
agctcgcgaccagtagatcgacgtgaagagctgaagaaagcgctcgataaagtagtcgaa
gaagccgaaaagagaggggtcgatctgattcttctaacgggtgatcttcttcattcgagg
aacaatccttcggttgtcgctctgcacgatcttctggattatctgaagaggatgatgaga
acagcgcctgtggtagtacttcctggaaaccacgactggaagggcttgaaactctttgga
aatttcataacatcgatctcgagtgacataacctttgtcatgtccttcgaacctgtggat
gtagaagccaaacggggccagaaggtgagaattctccccttcccgtatcctgacgagtcg
gaagctttgagaaaaaacgagggagacttccggttcttcctcgaatccagactcaacaaa
ctttacgaagaagcgctgaagaaggaagatttcgctatcttcatgggtcacttcactgtt
gaagggctctcgggttatgctggaatcgagcaaggaagagagatcattataaacagagcg
ttgattccgtcggtggttgattacgctgcgctcgggcacattcatagtttccgagagatt
cagaagcaacctctcaccatataccctggctctctcataaagatagatttcggagaagaa
gcggacgaaaaaggagcggtctttgttgagctgaaaagaggagaaccgcccaggtatgaa
agaatagacgtcgcccctcttccgttgaaaactctctactacaaaaagatagacacctct
gctctgagaagcataagggatttctgcaggaattttcctggttacgtgagggtggtttat
gaagaagactccggtattcttcccgacctgatgggagagatagataatctggtgaagata
gaaagaaagtcaaaaagagagatagaagaggtgcttcgagaaagcatggaagagttcaaa
gaagagctggacaaaattgattacttcgaactcttcaaggagtatttgaagaagagagaa
gaaaaccacgaaaagctgttgaaaatcctggatgagcttctcgatgaggtgaaaaagagt
gaggcctga
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