Thermotoga petrophila RKU-1: Tpet_1218
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Entry
Tpet_1218 CDS
T00525
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpt03016
]
Tpet_1218
Enzymes [BR:
tpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tpet_1218
Transfer RNA biogenesis [BR:
tpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tpet_1218
Prokaryotic type
Tpet_1218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ABQ47232
UniProt:
A5IM09
LinkDB
All DBs
Position
complement(1238922..1239659)
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AA seq
245 aa
AA seq
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MKRVAAVIEYDGSNFFGYQGQPDVRTVQGVIEDALERIFKQRIYIQAAGRTDTGVHANGQ
LIAFNCPNDRMTTEDIRNAMNANLPDDVYVKEVFEVPVNFHPRFDVTKRIYHYFILTSRQ
KNVFLRKYVWWFPYELDLDAMRKAVKYLEGTHDFTSFKTGSDERDPVRTIYRIRILRLKN
DLVLIRVEGRSFLRRMVRNIVAALVKVGLKQWEPEKMKEVLEARDRSAAAGTAPAHGLYF
YKVLF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtggcggcagtgatcgagtacgatggaagcaatttcttcggataccagggt
caacccgatgtcagaacggttcagggagtcatagaagatgcccttgaaaggatattcaaa
cagagaatctacatccaggcggcgggaagaacggacaccggtgttcatgcgaacggtcag
ctcatcgctttcaactgtccgaacgatcgaatgaccaccgaggacataagaaacgccatg
aacgcgaatcttccggatgatgtttatgtgaaagaggttttcgaagttcctgtgaatttt
catccccgtttcgatgtgacaaagagaatctatcactacttcattctgacttcgaggcag
aagaacgttttcctcagaaaatacgtctggtggtttccctacgagctcgatctcgatgcg
atgcgaaaagcggtgaagtatctggagggtacccatgacttcacctctttcaagacgggg
agtgatgaaagagatcctgtgcggaccatatacagaatcagaattttgaggttaaaaaac
gatcttgttctcataagagtggagggaaggtcctttctgagaagaatggttcgaaacatc
gttgccgctcttgtgaaagttggtttgaagcagtgggaacctgagaagatgaaggaggtg
ctcgaagcacgcgacaggagcgcggcggctggtaccgcacctgcacatggcttgtacttt
tacaaagtgctgttttga
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