KEGG   Thermotoga petrophila RKU-1: Tpet_1227
Entry
Tpet_1227         CDS       T00525                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tpt  Thermotoga petrophila RKU-1
Pathway
tpt02024  Quorum sensing
tpt03060  Protein export
tpt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tpt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Tpet_1227
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Tpet_1227
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Tpet_1227
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tpt02044]
    Tpet_1227
Enzymes [BR:tpt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Tpet_1227
Secretion system [BR:tpt02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Tpet_1227
  Eukaryotic Sec-SRP protein
   Tpet_1227
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA AAA_17 Zeta_toxin CLP1_P AAA_33 AAA_30 MMR_HSR1 ResIII ATP_bind_1 nSTAND3 NTPase_1 cobW AAA AAA_31 AAA_18 Thymidylate_kin AAA_19 T2SSE AAA_7 KAP_NTPase APS_kinase 6PF2K AAA_16 AAA_24 AAA_5 ABC_tran NACHT DUF6263 MG280 Arf SWI2_SNF2 PP2C_C KTI12 TAFH
Other DBs
NCBI-ProteinID: ABQ47241
UniProt: A5IM18
LinkDB
Position
complement(1245176..1246477)
AA seq 433 aa
MFENLQEKLSRVFKNLSGRGKITEKNVKDAIREVKLSLLEADVNYKVVKEFVDHVLQKAL
GEEVLRSLTPDQQFIKIVRDELVRIMGEKNEPLRLVHRPAPIMMVGLQGSGKTTTCAKLA
KLLKKEGRNPLLVAADLYRPAAVDQLVKLGNQIGINVVHDYNKTPVEIVKEAVDVAESTG
KDILIVDTAGRLHIDEEMMKELEEIKKILNPDEILLVVDAMMGQDAVNTAKVFDERLDLT
GFVVTKMDGDARGGVILSIKYVTGKPVKFIGTSEKIDGLEPFHPDRIANRILGMGDVLSL
IEKVEKELDQEKMKKSAEKFLKAEFTLEDFKEQLQEMKKLGPLSSILEMLPGAPKVDVEM
SEKELKKIEAIINSMTIEERRNPGIINASRKRRIARGSGTTVQDVNKLLKSYEQMKALMK
RMKKGRFKIPFGF
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgttcgagaatcttcaggagaagctgtccagagttttcaagaatctgtctggacgcgga
aagatcacagaaaagaatgtaaaagacgcgatcagggaagtgaaactttccctgctcgaa
gccgatgtcaactacaaagttgtgaaagaattcgtggaccacgtcctccagaaagctctc
ggagaggaagttctcaggagtctcacaccggaccagcagttcataaagatagtgagagac
gagcttgtaagaatcatgggagaaaagaacgaaccattgagactcgtccacagaccagct
cccataatgatggtgggacttcagggaagtggaaagaccacaacgtgtgcgaaactcgca
aaactcctcaaaaaagagggaaggaatcctttgcttgtcgcagcggatctgtaccgtccc
gcagccgttgatcagcttgtgaagcttggaaatcagattggtataaacgttgttcacgat
tacaacaaaacacccgttgagatagtgaaagaagctgtagacgttgctgagagtacagga
aaagatattctgatagtggataccgctggtcgacttcacatagacgaagagatgatgaaa
gagctggaagagataaagaaaatcctgaacccagatgagatcctgctcgtcgttgacgcg
atgatggggcaggacgcagtcaataccgccaaggtgttcgatgaaaggctcgatttaaca
ggattcgtcgtaacaaagatggacggagatgcaagaggcggagtcattctctccataaag
tacgtgacggggaagcccgtcaaattcattggaacgagtgaaaaaatcgacggtctggag
ccgttccatccagacagaatcgcaaaccgaatcctgggaatgggggacgttctttcactg
atcgaaaaagtggaaaaggaactcgatcaggaaaagatgaagaaaagcgcagaaaagttc
ctgaaggcagagttcaccctggaagatttcaaagaacagcttcaggagatgaaaaaactc
ggacctctttcttccattcttgagatgcttccaggtgcaccaaaggtcgatgtggagatg
agtgaaaaggagctgaaaaagatcgaggccatcataaattcgatgaccatagaagagaga
agaaatcccggtataataaacgccagtagaaaaaggagaattgcacgtggaagtggaacc
actgtccaggatgtgaacaaacttctcaaaagctatgaacagatgaaagctctaatgaag
aggatgaaaaaaggtagattcaaaataccatttggattctga

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