Thermotoga petrophila RKU-1: Tpet_1349
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Entry
Tpet_1349 CDS
T00525
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
tpt
Thermotoga petrophila RKU-1
Pathway
tpt03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Tpet_1349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tpt03011
]
Tpet_1349
Ribosome [BR:
tpt03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Tpet_1349
Bacteria
Tpet_1349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
CsrA
Motif
Other DBs
NCBI-ProteinID:
ABQ47363
UniProt:
A5IME0
LinkDB
All DBs
Position
complement(1340084..1341715)
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AA seq
543 aa
AA seq
DB search
MEPFEFNDEILSQYEPEEFRRGQIVTGVVIGKEDGGVVVDFGGKSEGFVPENELIKSLDE
YKVGENLTLQILNLNYEERSILSERRPVLRKTLEELRKDYEEKKPVKARIVSQTKGGYNV
LLKGVVSAFLPGSHSLLRRNDPIPEKEIEVIILEMVQTKRGSRIVVSRRALQDRKIEEFF
SEKKVGDIIEGTVKGISNAGVEVEISEGIRGFIPKSELSYDNRISPEDVVKPGQNITAKI
IELDERKKNVILSLKRLMPDPWEKVKEKYPVGKVVGGEVISIHSFGFFVRLEPGVEGLVP
RSEVFWGNARKNLEEVVSVGDLVKVEVINVDKENRKLTLSYRKAKGDPWENIEDRYNVNN
VVTGKVTGIIKQGAFVELEEGVEGFVPVSEISWKRIDEPGEILKIGEKVKVKILKIDKEN
RKITLSIRRTQENPWERALKELKPDSIVRGTIERIVNSGVIVKVEKYDVEGFVPNNHLVS
EPETGKILNLVVLRIDPDEVFGGRMILSEKRYEERKNIEEYKKMVEKESSQKTIGDLLKK
NGE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatttgaattcaacgatgaaatcctcagccagtacgaacctgaggagttcaga
agggggcagatcgtaacgggagtggttataggtaaggaagacggcggcgtggtggtggat
ttcgggggaaaaagtgaaggattcgtaccggagaacgaactgatcaaatcattagatgag
tacaaagtgggtgagaatctcacccttcaaatactgaatctgaactacgaagagagatct
attctctcagagaggagacccgttcttcgaaaaacactcgaagagttgagaaaagattac
gaagaaaagaaacctgtgaaagcccgcattgtttcgcagacaaagggaggatacaacgtt
ttattgaaaggagtagtctctgcttttcttccaggatcacactctcttctcagaagaaac
gatcctatacctgaaaaagaaatagaagtcatcattctggaaatggtacagacaaaacgg
ggatccagaatagttgtttcgcgaagagctctccaggataggaaaattgaagagttcttc
tcagaaaagaaagtgggggatatcatagaaggtaccgtgaaagggatcagcaacgcaggt
gtcgaggttgaaatttcggagggaattaggggattcatccccaagagcgaactcagctac
gacaacaggatatcccctgaagacgtagtgaaacccggccagaacataacagcgaagata
atcgaactggacgagagaaaaaagaacgtcatcctgagtttgaaaagactcatgcccgat
ccgtgggaaaaagtgaaggagaaatacccggttggaaaagtggtgggtggagaagttatt
tcgattcattcgtttggattttttgtgaggctggagcccggtgtggaaggactcgttccg
agatctgaggtcttctgggggaatgcaagaaaaaacctagaagaagtagtgagtgttgga
gatctggtgaaggttgaagttatcaatgtagataaagaaaacagaaaactcactctgagt
tacagaaaagcaaagggagatccatgggaaaacatcgaggacagatacaatgtcaacaac
gtggtgacgggaaaggtgacaggaatcataaaacagggagcttttgtcgagttagaagaa
ggcgttgaaggattcgtccccgtctctgaaatttcgtggaaaagaatcgacgaacccgga
gaaattctaaagatcggtgaaaaagtgaaggtgaagatcttgaagatagacaaagaaaac
agaaagatcactctcagcataagaagaacccaagaaaatccttgggaacgtgcactcaaa
gagttgaaaccagattctattgtgagggggaccatagaaagaatcgtgaactcaggagtg
atagtaaaagtcgaaaagtacgatgtggaaggtttcgtgccgaacaaccatcttgtcagt
gaacctgaaacggggaaaattttaaacctcgttgttcttagaatagatcccgatgaagtg
tttggcggaagaatgatactgagtgagaagcgatatgaagagagaaagaacatagaggag
tacaaaaaaatggtagagaaggagagttctcagaaaaccattggagaccttctcaagaag
aatggagagtga
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