KEGG   Thermotoga petrophila RKU-1: Tpet_1349
Entry
Tpet_1349         CDS       T00525                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K02945  small subunit ribosomal protein S1
Organism
tpt  Thermotoga petrophila RKU-1
Pathway
tpt03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tpt00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Tpet_1349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tpt03011]
    Tpet_1349
Ribosome [BR:tpt03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Tpet_1349
  Bacteria
    Tpet_1349
SSDB
Motif
Pfam: S1 Spt6_S1 S1_2 CsrA
Other DBs
NCBI-ProteinID: ABQ47363
UniProt: A5IME0
LinkDB
Position
complement(1340084..1341715)
AA seq 543 aa
MEPFEFNDEILSQYEPEEFRRGQIVTGVVIGKEDGGVVVDFGGKSEGFVPENELIKSLDE
YKVGENLTLQILNLNYEERSILSERRPVLRKTLEELRKDYEEKKPVKARIVSQTKGGYNV
LLKGVVSAFLPGSHSLLRRNDPIPEKEIEVIILEMVQTKRGSRIVVSRRALQDRKIEEFF
SEKKVGDIIEGTVKGISNAGVEVEISEGIRGFIPKSELSYDNRISPEDVVKPGQNITAKI
IELDERKKNVILSLKRLMPDPWEKVKEKYPVGKVVGGEVISIHSFGFFVRLEPGVEGLVP
RSEVFWGNARKNLEEVVSVGDLVKVEVINVDKENRKLTLSYRKAKGDPWENIEDRYNVNN
VVTGKVTGIIKQGAFVELEEGVEGFVPVSEISWKRIDEPGEILKIGEKVKVKILKIDKEN
RKITLSIRRTQENPWERALKELKPDSIVRGTIERIVNSGVIVKVEKYDVEGFVPNNHLVS
EPETGKILNLVVLRIDPDEVFGGRMILSEKRYEERKNIEEYKKMVEKESSQKTIGDLLKK
NGE
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggaaccatttgaattcaacgatgaaatcctcagccagtacgaacctgaggagttcaga
agggggcagatcgtaacgggagtggttataggtaaggaagacggcggcgtggtggtggat
ttcgggggaaaaagtgaaggattcgtaccggagaacgaactgatcaaatcattagatgag
tacaaagtgggtgagaatctcacccttcaaatactgaatctgaactacgaagagagatct
attctctcagagaggagacccgttcttcgaaaaacactcgaagagttgagaaaagattac
gaagaaaagaaacctgtgaaagcccgcattgtttcgcagacaaagggaggatacaacgtt
ttattgaaaggagtagtctctgcttttcttccaggatcacactctcttctcagaagaaac
gatcctatacctgaaaaagaaatagaagtcatcattctggaaatggtacagacaaaacgg
ggatccagaatagttgtttcgcgaagagctctccaggataggaaaattgaagagttcttc
tcagaaaagaaagtgggggatatcatagaaggtaccgtgaaagggatcagcaacgcaggt
gtcgaggttgaaatttcggagggaattaggggattcatccccaagagcgaactcagctac
gacaacaggatatcccctgaagacgtagtgaaacccggccagaacataacagcgaagata
atcgaactggacgagagaaaaaagaacgtcatcctgagtttgaaaagactcatgcccgat
ccgtgggaaaaagtgaaggagaaatacccggttggaaaagtggtgggtggagaagttatt
tcgattcattcgtttggattttttgtgaggctggagcccggtgtggaaggactcgttccg
agatctgaggtcttctgggggaatgcaagaaaaaacctagaagaagtagtgagtgttgga
gatctggtgaaggttgaagttatcaatgtagataaagaaaacagaaaactcactctgagt
tacagaaaagcaaagggagatccatgggaaaacatcgaggacagatacaatgtcaacaac
gtggtgacgggaaaggtgacaggaatcataaaacagggagcttttgtcgagttagaagaa
ggcgttgaaggattcgtccccgtctctgaaatttcgtggaaaagaatcgacgaacccgga
gaaattctaaagatcggtgaaaaagtgaaggtgaagatcttgaagatagacaaagaaaac
agaaagatcactctcagcataagaagaacccaagaaaatccttgggaacgtgcactcaaa
gagttgaaaccagattctattgtgagggggaccatagaaagaatcgtgaactcaggagtg
atagtaaaagtcgaaaagtacgatgtggaaggtttcgtgccgaacaaccatcttgtcagt
gaacctgaaacggggaaaattttaaacctcgttgttcttagaatagatcccgatgaagtg
tttggcggaagaatgatactgagtgagaagcgatatgaagagagaaagaacatagaggag
tacaaaaaaatggtagagaaggagagttctcagaaaaccattggagaccttctcaagaag
aatggagagtga

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