Thermotoga petrophila RKU-1: Tpet_1493
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Entry
Tpet_1493 CDS
T00525
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
tpt
Thermotoga petrophila RKU-1
Pathway
tpt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tpet_1493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_1493
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Tpet_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
YajC
DUF4106
ISG65-75
FKBP26_IF
GBR2_CC
Motif
Other DBs
NCBI-ProteinID:
ABQ47501
UniProt:
A5IMS8
LinkDB
All DBs
Position
1479095..1481368
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AA seq
757 aa
AA seq
DB search
MDYLESLDFPKVVEIVKKYALSDLGRKHLDTLKPTVNPWDELELVEELLNYFARWGEPPI
KGLNDISQEVERVKSGSALEPWELLRVSVFLEGCDILKKDFEKREYSRLKETFSRLSSFR
DFVEEVNRCIEQDGEISDRASPRLREIRTEKKRLSSEIKRKADDFVRTHSQILQEQMYVY
RDGRYLFPVKASMRNAVRGIVHHLSSSGATVFLEPDEFVELNNRVRLLEEEERLEISRIL
RQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTVVKPSSRIRLVNARHPLIPK
ERVVPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPK
IMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAVAII
EDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQI
AEKLGLDKRIIENARSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKLREKY
EEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAIHVAKTGSVDEMREAVKTIEKEKK
DLEQKRIEEATEEEIKPGDHVKMEGGTSVGKVVEVKSGTALVDFGFLRLKVPVSKLKKAK
KEEKEESSAVSYRPSSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGK
LASGVWEILRKDKRVVSFRFGTPSEGGTGVTVVEVKV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtggattatctcgaatcactcgattttccaaaagttgtggagatagtaaagaaatacgcg
ctctctgacctgggaagaaaacatctggacactctcaaaccgacggtgaatccgtgggac
gagctcgaactcgtggaggagcttctgaactattttgccaggtggggagagcctcccata
aagggattgaacgatatctctcaggaagtggagagggtgaagtccggttcagccttggaa
ccatgggaacttcttcgcgtttccgtgtttctcgaaggctgtgacatcctgaagaaggac
ttcgaaaagcgtgaatacagcaggctcaaagagaccttctccagactcagctccttcaga
gatttcgtggaagaggtgaacaggtgcatagaacaggatggagagatctcggaccgtgcg
agtcccagattgagggagatcagaacggaaaagaagcgtctttccagcgagataaagaga
aaggccgatgatttcgtcaggacgcactctcagatccttcaggaacagatgtacgtttac
agggatggaaggtatctcttccccgtgaaggcttccatgaggaacgcagtgaggggaatc
gttcaccatctctcctcttccggtgccaccgtctttctggagcccgacgagttcgtcgaa
ctgaacaacagagtgcgtcttttagaagaggaggaaaggctggagatcagcaggatcctg
agacagctgacgaacatactcctttccaggctcaacgaccttgagaggaacgtggaactc
atagcgcgtttcgactccctctacgcgagggtgaagttcgcaagagagttcaacggaacc
gtcgtgaaaccttcttcgcggataagacttgtcaacgcaagacatccgttgataccaaag
gagagagtcgttccaataaatcttgagcttccacccaacaaaagaggtttcatcataacg
ggtccaaacatgggcggaaagaccgtgactgtgaaaaccgttggtctttttaccgccctc
atgatgagtggcttccctctcccctgtgatgaaggaacggagctgaaggtctttccaaag
atcatggcggacatcggtgaggagcagagcatagaacagagcctcagcaccttctcgtcg
cacatgaagaagatcgtggagatcgtgaagaatgcagacagcgattcactggtcatcctc
gacgagctgggctcggggacggatccggtggaaggagccgcccttgccgtcgcgataata
gaggatcttctggaaaaaggagcaacgatctttgtaaccacacacctcacacctgtgaag
gtcttcgccatgaaccatcctctgctcttgaacgcctccatggagttcgatccggaaacc
ctctcaccaacttacagggttctggttggagttccaggaggttctcacgctttccagata
gcagaaaagttgggactcgacaaacgtataatcgaaaacgccagatcgagactctctcgg
gaggagatggaactcgagggactcataaggtctctccacgagaagatctcgcttcttgaa
gaggagaagagaaaactccagaaagaacgcgaagagtacatgaaactgagggagaagtac
gaggaagattacaaaaagctgaggaggatgaagatagaagagttcgacaaagagctgagg
gagctcaacgattacatcagaaaggtcaagaaggaactcgatcaggcgatacacgtggca
aaaactggcagcgttgacgagatgagagaagcggtgaagacgatagagaaagagaagaaa
gatctggagcaaaagagaatcgaagaagcgaccgaagaagaaataaaacccggagatcac
gtgaaaatggaaggtggaacctctgtggggaaggtcgttgaggtgaaaagtggcaccgcc
cttgttgactttggctttctcagattgaaggtgcccgtttcgaaactgaaaaaggctaaa
aaagaggagaaggaagaatcttcagcggtctcttacaggccttcgagcttcagaacggaa
atagacataaggggtatgacggttgaagaagcggagccggttgtgaagaagttcatcgat
gacctgatgatgaacggcatcagcaagggatacataatacacggaaagggcaccggaaag
ctcgcatctggagtatgggaaatactgagaaaggacaaaagagtggtttctttcagattc
ggaacaccttctgaggggggaacgggtgtcacggtggtggaggtgaaagtgtga
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