Thermotoga petrophila RKU-1: Tpet_1641
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Entry
Tpet_1641 CDS
T00525
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tpt
Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpt03019
]
Tpet_1641
03009 Ribosome biogenesis [BR:
tpt03009
]
Tpet_1641
03036 Chromosome and associated proteins [BR:
tpt03036
]
Tpet_1641
Enzymes [BR:
tpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Tpet_1641
Messenger RNA biogenesis [BR:
tpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tpet_1641
Ribosome biogenesis [BR:
tpt03009
]
Eukaryotic type
90S particles
RNase
Tpet_1641
Prokaryotic type
rRNA processing factors
Tpet_1641
Chromosome and associated proteins [BR:
tpt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Tpet_1641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RE_XamI
PRD
Motif
Other DBs
NCBI-ProteinID:
ABQ47647
UniProt:
A5IN74
LinkDB
All DBs
Position
complement(1636949..1637671)
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AA seq
240 aa
AA seq
DB search
MNESERKIVEEFQKKTGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAV
LELFVCEILYKKYPEAEVGDLARAKSAAASEEVLAMVSRELNLGKFLFLGKGEEKTGGRD
RDSILADAFEALLAAIYLDQGYHKIKELFEEEFELYIEKIMRGEMLFDYKTALQEIVQSE
HKVPPEYVLVRTEKNDGDRIFVVEVRVDGKSIAMGRGRTKKEAEKEAARIAYEKLLKERS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagagtgagagaaagatcgtggaggagtttcagaaaaaaacaggaatcaacttc
aagaacgaagaacttctctttcgggctctatgccacagttcttacgcgaacgagcagaat
caagcggggaggaaagacgtggaatcgaacgaaaagctggagtttctgggggacgccgtt
ctggagctcttcgtgtgtgaaatactctacaagaaatatccggaagcggaagtgggagac
ctggcccgagcgaaatccgccgcggcgagtgaggaagtgctcgctatggtttccagggag
ctgaaccttggtaaatttctgtttctcggaaaaggagaggaaaaaaccggaggacgtgat
agagattccatacttgccgacgcgtttgaagcgcttctggccgccatatacctcgatcaa
ggctatcataagataaaggagctctttgaagaggaatttgagctctacatagaaaagatc
atgaggggtgaaatgctcttcgactacaaaacggctctccaggaaatagtccagagcgaa
cacaaagtgcctccggaatacgtactggtgagaacggaaaaaaacgacggtgacaggatt
ttcgttgtggaagtgagagtagatggaaagtctatcgccatgggcagaggcagaaccaag
aaggaagccgaaaaggaggccgcaagaatcgcctacgaaaagcttttgaaggagagatca
tga
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integrated database retrieval system
