Thermotoga petrophila RKU-1: Tpet_1786
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Entry
Tpet_1786 CDS
T00525
Name
(GenBank) DNA mismatch repair protein MutS domain protein
KO
K03555
DNA mismatch repair protein MutS
Organism
tpt
Thermotoga petrophila RKU-1
Pathway
tpt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tpet_1786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpt03400
]
Tpet_1786
DNA repair and recombination proteins [BR:
tpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Tpet_1786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ABQ47786
UniProt:
A5INL3
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Position
1796435..1797940
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AA seq
501 aa
AA seq
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MRVLLMYPDKDFNLKRELPFNADDLTRDLGLDVIFDHMAKGDGYLYSVVRNVILNPETDL
ETIKYRQEILKDCMKNQNVVRRLFQIPLEVQENKKKNWWGVFGWKTPINVLNGSRKALEA
MLVALRELKKLADEHRHNFHSRGFTRFFEMIRTELDEAYLQTVEKHLINLRFSNGMLFKV
KLGKGNEGKDYTLCQPDSSRSILKRLLSVRRMYSYKLHPRDESGARALEKLTNLGLRRVA
ATVYYAAEHVEKFLNKIREELAFYIGCLNLLEDVEKSKISFPDPKPIDEDDVTAFRGLYD
LSLLLIKRNRVISNDLNTRGKRVFFIMGANRGGKTTFLRSIGQAQLMMQAGMFVPASYFE
SNVCKGIFTHFKREEDPSLKRGKFEEELVRMNEIVLHLHRRSMVLFNESFSSTNEMEGSE
VAYQIVRALLDSRVKVFYVTHVYELARRFTGDERVMFLQAERKPTGERTFKIKEGLPSQT
SHAKDIYLKVFRSSTSTSPSS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagagtacttttgatgtacccagacaaggatttcaatttgaaaagagagttgcctttc
aatgcagatgatttgacaagagatctcggtttagatgtgatattcgatcacatggcaaag
ggagatggttacctgtatagtgttgtgagaaatgtcattctgaatccagaaaccgatctg
gagacgataaagtaccgccaggaaattctcaaagattgtatgaaaaaccagaacgtcgta
aggcggttgtttcagataccgctggaggttcaagaaaacaagaagaaaaattggtggggg
gtttttggatggaaaactcctatcaatgtcctgaacggctccagaaaagctttagaagcc
atgctggtagcgctcagagagcttaaaaagttggcagatgaacatcgtcacaattttcat
tctcgaggcttcacaaggtttttcgagatgataaggacggaactggatgaagcctactta
caaactgtggagaagcatctcattaatttgagattttcaaacggtatgttgttcaaagta
aaactcggaaaaggtaacgaaggaaaagattacaccctctgccagcctgactcttcaaga
agcatcctgaaaagactactcagtgtgagacgaatgtattcttataaattacatccaaga
gatgaaagtggagcacgagcactggagaagttgaccaatttgggacttcgcagggtagca
gccacagtttactacgcggcagagcatgtagaaaaatttttgaacaaaattcgagaagaa
ctggctttctatattggttgtctcaacttgctggaagatgtagaaaaatcgaagataagt
tttcccgatcccaaaccaattgatgaggacgatgtaaccgccttcagagggctttacgat
cttagtttgcttctaataaagagaaatagagtgataagtaacgatctgaacacgcgtggt
aaaagagtttttttcatcatgggagcgaatcgcggtgggaagaccactttcctgagaagt
atagggcaagctcagctgatgatgcaagctggtatgttcgttccggcgtcgtactttgaa
tcgaacgtttgcaaaggaatttttacgcactttaaaagagaggaagatccaagcttgaag
agaggaaaatttgaagaagaacttgtcagaatgaatgagatagtccttcatctgcataga
aggtctatggtgctattcaacgagtccttctcatctacgaatgaaatggagggttccgaa
gtggcctaccagattgttcgagctctactggacagccgtgttaaagttttttacgtaaca
cacgtgtacgaactggcccgccgttttacaggagatgaaagagtgatgtttctacaagca
gaaaggaaacctaccggtgaaagaaccttcaagatcaaagaaggcctgccttcgcagaca
agtcatgcgaaggatatatacctcaaagtgttcagatcatcaacttcaacttcaccatcc
tcttga
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