Tatumella ptyseos: NCTC11468_00005
Help
Entry
NCTC11468_00005 CDS
T05493
Symbol
gyrB_2
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpty03032
]
NCTC11468_00005 (gyrB_2)
03400 DNA repair and recombination proteins [BR:
tpty03400
]
NCTC11468_00005 (gyrB_2)
Enzymes [BR:
tpty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC11468_00005 (gyrB_2)
DNA replication proteins [BR:
tpty03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11468_00005 (gyrB_2)
DNA repair and recombination proteins [BR:
tpty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC11468_00005 (gyrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
Motif
Other DBs
NCBI-ProteinID:
SQK71602
UniProt:
A0A2X5P4H2
LinkDB
All DBs
Position
1:3686..5743
Genome browser
AA seq
685 aa
AA seq
DB search
MGVSVVNALSEKLELTIRRDGKVHQQIYQHGVPTAPLAVIGETDVSGTAVRFWASHQTFT
NVTDFEYDILAKRLRELSFLNSGVSIRLIDKRTDKSDHYHYEGGIRAFVEYLNKNKTPIH
PNVFYFSTEKDGIGVEVALQWNDSFQENIYCFTNNIPQRDGGTHLAGFRASMTRTLNAYM
DKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESQMNELL
SEYLLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAL
SEVYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCG
IGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKV
KKGKQEQYIKDDDAMDQYQIAIALDGATLHTNASAPALSGASLENLVSMYNSTEKMIKRM
TRRYPAALLRGLVYHPTLSDLSDQAAVQAWMDALVAQLEEREQHGSSYTGIVREDREHQR
FEPVLRIRTHGVDTDYPLDSEFIYGPEYQRINTLGEQLRGLIEEDAFIERGERRQPVASF
EQAVEWLVKESRRGLSVQRYKGLGEMNPEQLWETTMDPESRRMMRVTIKDAIAADQLFTT
LMGDAVEPRRAFIEENALKAANIDI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgtctctgtcgtcaacgcattgtctgaaaagctggaactgactatccgtcgtgac
ggtaaagttcatcagcaaatttatcagcacggtgtaccgacagcaccgctggcggtgatc
ggcgaaacagatgtgagcgggactgcggtacgtttctgggccagtcatcagacatttacg
aatgtgaccgatttcgaatacgacattctggcaaaacgcctgcgcgaactctctttcctg
aattccggcgtgtctatccgcctgatcgacaagcgtacagataagagtgatcactaccac
tacgaaggtggtatccgcgcgtttgtggagtatctgaataaaaataaaacgcctatccat
ccgaacgtcttctatttcagtacggaaaaagacggtatcggcgtggaagttgcgttgcag
tggaacgatagcttccaggaaaatatctactgctttaccaacaacattccgcagagggat
ggcgggacgcaccttgccggtttccgtgcctcaatgacccgtacactgaatgcgtatatg
gataaagaaggctacagtaaaaaggcgaaggtcagtgccaccggtgatgatgcccgtgaa
ggtctgatcgcggttgtgtcggtgaaagtgccggacccgaaattctcttcccagaccaag
gataagctggtctcttcggaagtgaaatcggcagtggaatcgcagatgaatgaactgctc
tctgaatatctgctggaaaatccgtccgatgccaagattgtcgtcggtaaaattatcgat
gctgcccgtgcgcgtgaagcggcgcgccgtgcccgtgaaatgacccgtcgtaaaggcgcg
ctggacctggccggattaccgggcaaactggcggattgccaggaacgcgaccctgcgctt
tcagaagtttatctggtggaaggggactctgcgggcggctctgcgaagcaggggcgtaac
cgcaagaatcaggccattttacctctgaaaggtaagatcctgaacgtcgaaaaagcccgt
tttgacaagatgctctcttcccaggaagtggcaacactgatcaccgcgctgggttgtggt
atcggccgcgatgagtacaatccggacaaattgcgttatcacagtatcattattatgacg
gatgcggacgtcgatggttcgcatatccgtacgctgctgctgactttcttctatcgtcag
atgcctgaaatcattgaacgcggccatgtgtttatcgcacagccaccgctgtacaaagtg
aaaaaaggtaagcaggaacagtacatcaaagatgatgatgcgatggaccagtaccagata
gcgattgcgctggacggagctaccctgcataccaatgccagcgcacctgcgctgagcgga
gcctcgctggaaaatctggtatcaatgtacaacagtacagagaagatgattaagcgcatg
acccgtcgctatccggcggcattactgagagggctggtgtatcacccgacgctgagtgat
ttatctgaccaggcggccgtacaggcgtggatggatgctctggtggcccaactggaagaa
cgcgaacagcacggtagcagctataccggtattgtccgtgaagaccgtgaacatcagcgt
tttgagccggtacttcgtattcgtacacatggtgtggatacggattatcctctggattca
gaatttatttacggaccggaataccagagaattaatacactgggtgagcaacttcgtggt
cttatcgaagaagatgccttcattgaacgcggggagcgtcgtcagccggtggccagcttt
gagcaggccgtggagtggctggtgaaagaatccagacgtggcctgtcagtacagcgctat
aaaggtctgggtgagatgaacccggaacagctctgggaaacgacaatggatccggaaagc
cgccgcatgatgcgtgtgactataaaagatgccattgccgccgatcagctgtttaccacg
ctgatgggggatgcggttgaacctcgtcgcgcctttatcgaagaaaatgccctgaaagcc
gcgaatatcgatatctga
DBGET
integrated database retrieval system
