Tatumella ptyseos: NCTC11468_00345
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Entry
NCTC11468_00345 CDS
T05493
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
tpty
Tatumella ptyseos
Pathway
tpty00230
Purine metabolism
tpty00240
Pyrimidine metabolism
tpty01100
Metabolic pathways
tpty01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NCTC11468_00345 (nrdD)
00240 Pyrimidine metabolism
NCTC11468_00345 (nrdD)
Enzymes [BR:
tpty01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
NCTC11468_00345 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
F420_ligase
DUF7129
Zn_ribbon_TiaS
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
SQK72097
UniProt:
A0A2X5NG73
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All DBs
Position
1:complement(305866..308001)
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AA seq
711 aa
AA seq
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MDTIVVKRDGCKVPFCRQRIVDAIRAAASAAGVTDPAYCEQMADQVCAELLQNPELDISR
IQQVVEDTLMTGPWPDVARCYIEYRHDRDTRREQRSQLYREIRGLIEQTNTSLLNENANK
DSKVIPTQRDLLAGIVARHYARQHILPARVMKAHDRGEIHFHDLDYSPFFPMFNCMLIDL
EGMLTRGFKMGNAEIAPPKSIATATAVTAQIIAQVASHIYGGTTINRIDEVLAPYVEASL
QRHRDTGREWQVADVEAYAEARTRKECYDAFQALEYEVNTLHTANGQTPFVTFGFGLGTS
AASRMIQTSILQNRIAGLGKNHKTAVFPKLVFAIRDGINHRPGDCNYDIKQLALECASQR
MYPDILNYDQVVKITGSFKTPMGCRSFLGVYEEEGRQIHEGRNNIGVVSLNLPRIALEAA
GDETRFWSLLDERLEIARQALLTRIHRLENTCARVAPILYMEGACGVRLNADDNVGKIFR
NGRASISLGFIGLHETINALKGQQQHLFDSAELQQTALAIVSRLRAATDLWKAETGYGFS
LYSTPSENLCDRFCRLDAAEFGVVPGVTDKGYYTNSFHLDVEKAANPYDKIDFESPYPAL
SDGGFICYGEYPNLRHNLKALEDVWDYSYSRIPYYGTNTPIDECYDCGFKGEFNCTSKGF
TCPQCGNHEPARVSVTRRVCGYLGSPDARPFNHGKQEEVRRRVKHMPDGLA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatactatcgttgtaaaacgggatggttgcaaagtacccttctgccggcagcgcatc
gtggatgccatccgggccgcagccagtgccgccggagtgaccgatcccgcgtattgtgag
cagatggccgaccaggtctgtgcagagttactgcaaaacccggagctggatatcagccgg
atccagcaggtggtagaagatacgctgatgacaggtccgtggccggatgtggcccgctgc
tatattgaatatcgtcatgacagggatacccgtcgcgaacagcgcagccagctctaccgg
gagatccgcgggctaattgaacagacgaatacgtctctgctgaacgaaaatgcgaataaa
gacagtaaagtgatcccgacgcagcgggatttactggcagggatcgtcgccagacattat
gcgcggcagcatattttaccggcccgggtgatgaaggcgcatgaccgcggagaaatccat
tttcacgacctggactactctccgttcttcccgatgttcaattgcatgctgattgacctg
gaaggaatgctgacccggggatttaaaatgggtaatgccgaaattgcgccgcccaaatcc
attgccacggcaaccgcagtgaccgcacaaatcatcgctcaggtcgccagccatatttat
ggcggtaccacgattaatcgtattgatgaagtcctcgcgccctatgtggaagccagcctg
caacgtcaccgtgatacgggccgggaatggcaggttgccgatgttgaagcctatgccgag
gcccggacacgtaaagagtgttatgacgcgtttcaggcactggaatatgaagtgaatacc
ctgcacaccgcgaacggccagacgccgtttgtgactttcggtttcggactggggacatct
gctgcctcccgcatgatccagacctcgattctgcaaaaccgcatcgccgggctgggtaaa
aaccataaaacggcggtgttcccgaaactggtattcgccatccgcgacgggatcaaccac
cggcccggagactgtaactacgatattaaacaactggcgctggaatgtgccagccagcgg
atgtacccggatattctgaattacgaccaggtagtaaaaattaccgggtcctttaagacc
ccgatgggctgccgcagttttctgggcgtttatgaggaagaaggccggcagatccacgaa
ggacggaacaatatcggtgtggtcagtctgaacctcccgcggatcgctctggaagcggca
ggcgatgagacgcgcttttggtcattgctcgatgaacgcctggagatcgcccggcaggcg
ttactgacccgtatccaccggctggagaatacctgtgccagagttgcgccgatcctgtat
atggaaggggcctgtggtgtccgcctcaatgcggatgacaacgtcggcaagatattccgg
aacggccgggcctcgatctcactgggctttatcggcctgcatgaaacgattaacgcgctg
aaaggtcagcagcagcatctgtttgactccgcagagttgcagcagacagccctggcgatt
gtcagccggttacgcgcggcgaccgacttatggaaggcagagaccggttacgggttcagt
ctttacagcacgccgagtgagaacctgtgcgatcgtttctgccggctggatgctgctgaa
tttggtgtggttccgggagtcaccgataagggctattacaccaacagtttccatctggat
gtggaaaaggccgccaatccttacgataaaattgattttgaatctccctatccggctctc
tctgacggtggtttcatctgctatggtgagtatccgaacctgcgccataatctgaaagcc
ctggaagatgtctgggactacagctattcccgtatcccttattacggcaccaataccccg
atcgatgagtgctatgactgtggttttaaaggcgagtttaactgtaccagcaaaggattt
acctgcccgcaatgcggcaatcatgagccggccagagtctctgtgacccggcgagtgtgc
ggttacctgggcagtcccgatgcccgcccctttaatcacggaaaacaggaagaagtcaga
cgccgggtaaaacatatgcccgacgggctggcctga
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