Tatumella ptyseos: NCTC11468_00859
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Entry
NCTC11468_00859 CDS
T05493
Symbol
recD_2
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tpty
Tatumella ptyseos
Pathway
tpty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC11468_00859 (recD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpty03400
]
NCTC11468_00859 (recD_2)
Enzymes [BR:
tpty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC11468_00859 (recD_2)
DNA repair and recombination proteins [BR:
tpty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11468_00859 (recD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
SH3_13
Helicase_RecD
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
PhoH
AAA_16
AAA_28
nSTAND3
FtsK_SpoIIIE
UvrD_C
ABC_tran
DO-GTPase1
AAA_5
MukB
Terminase_6N
AAA_24
Motif
Other DBs
NCBI-ProteinID:
SQK72692
UniProt:
A0A2X5P7L4
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All DBs
Position
1:795265..796644
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AA seq
459 aa
AA seq
DB search
MAAAVALTRQYSVISGGPGTGKTTTVARLLAALLTLTPGRLRIRMAAPTGKAAARLTESL
GKALQALPVSDTLKARFPQEATTLHRLLGAQPATRRLRYHAGNPLHLDVLVVDEASMVDL
SMMASLISALPPEARVIFLGDRDQLASVEAGAVLGDLCRSAEFGYSPARAAELGALTGAD
IAGTEVAQAPAVRDSLCLLQQSYRFSASSGIGQLAAAVNCGDLSRLAAIRRHQDFRDIRL
CPLDSTEQWQSMLNDISQGYAEVIEKVNNHVSPAEVLHTFSRYQLLCALREGPFGVSGLN
QRIEQRLRQQQRLPSATGSGNLYAGRPVMITRNDNALGLFNGDIGIMMYDETQQLKVHFL
LPDGSVKAVHPSRLPPHDTAWAMTVHKSQGSEFDHTALVLPAQYSPVLSRELVYTAITRA
RTQLTIYSDEAVFTRAIQSRTRRRSGLSDQLVSEPLRPH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggcggccgctgtcgcgctgacacgtcagtattcggtgatctccggcggaccggggacc
ggcaaaacgacgacagtggcccgtctgctggccgcattactgaccctgacgcctggccgg
ttacgtattcgtatggctgcgccaacgggtaaagctgcggccaggctgaccgaatcactg
ggtaaagccttacaggcgctgccggtcagcgacacactgaaagcccgctttccgcaggag
gccaccaccctgcaccggctactgggggcgcagccggccacacgacgcttacgctatcat
gccggtaaccctctgcatctggatgtactggtggtagatgaagcctcaatggtggatctt
tcgatgatggcatccctgatcagtgcgctaccacctgaggccagggtgatttttctgggc
gaccgtgaccagctggcttcggttgaggccggtgctgtactgggtgatctttgccgtagc
gcggaatttggctacagtccggcccgtgctgcagagctgggcgcgttgaccggtgcagac
attgccgggacagaggttgctcaggcaccggcagtgcgtgacagcctgtgcctgttacaa
cagagttaccggttctcggccagttcgggtatagggcaactggccgctgccgtcaattgc
ggtgatctgtcgcgactggcggctatccggcggcatcaggatttccgtgatatccggtta
tgcccgctggactctacggaacaatggcagtcgatgctgaatgacatcagtcagggatat
gccgaagtgattgaaaaggtgaataatcatgtttccccggcggaggtgttacataccttc
agccgataccagttgctttgcgcactgcgggaagggccgtttggcgtcagcggtctgaac
cagcgtatcgagcagcgtctgaggcaacagcagcgtctgccgtcggctaccggaagcggt
aatctttatgccggacgtccggtcatgatcacccgtaacgacaatgcactgggactgttt
aacggggatattggcatcatgatgtacgatgaaacgcaacagctaaaggtgcacttcctg
ctaccggatggcagtgtaaaagcggttcatcccagtcgtttgccaccgcatgatacggcc
tgggcaatgacggttcataaatcgcaaggctcggagtttgatcacacggccctggtgctg
ccggcacagtacagcccggtcctgagccgggagctggtgtacaccgccattacccgggcg
cggacacaactgaccatctacagtgatgaagccgtatttacgcgggcgatacagtcccgt
acccgaagacgcagtggattaagtgaccagctggtgagtgaaccgttgcggcctcactga
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