Tatumella ptyseos: NCTC11468_00926
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Entry
NCTC11468_00926 CDS
T05493
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor rpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpty03021
]
NCTC11468_00926 (rpoS)
Transcription machinery [BR:
tpty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC11468_00926 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
SQK72800
UniProt:
A0A2X5PH86
LinkDB
All DBs
Position
1:851183..852172
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AA seq
329 aa
AA seq
DB search
MNRNTLKDSELQEDAFDDNGNEAFDENALVANDSKDDDVTEDDQLTQATSQRVLDATQLY
LGEIGFSPLLTAEEEVFFARRALRGDVAARRRMIESNLRLVVKISRRYNNRGLALLDLIE
EGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRT
ARELAHVLDHEPSAEEIAGELDKPVEDVSRMLKLNERITSVDTPLGGESDKALLDILSDD
NDSGPEDRTQNNDMKQSIVKWLYELNPKQREVLARRFGLLGYEAATLEDVGQEISLTRER
VRQIQVEGLRRLREILQGQGLSIEALFRE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaaatacacttaaagatagtgagttacaggaagatgcgtttgatgacaatggc
aacgaagcctttgatgagaatgcattagtagcaaatgactctaaagatgatgacgtaaca
gaagatgatcagctgactcaggcgacgtctcagcgtgttctggatgccactcaactctac
cttggggaaattggattttctccgttactgaccgccgaagaagaagttttctttgcccgt
cgggctttacgcggtgacgtggcagcacgtcgccgtatgatcgaaagtaacctgcgtctg
gtagtgaaaatatcgcggcgttacaacaatcgtggtctggcactgcttgacctgattgaa
gaagggaatctcggcctgatccgcgcggttgagaaatttgatcctgaacgtggattccgt
ttctcaacttatgcgacctggtggatccgccagacgattgagcgtgcaattatgaatcag
acacggactatccgtctgcctattcatattgtgaaagagcttaatgtctatctgcggacc
gccagagaactggctcatgtccttgaccatgagccaagtgcagaagaaattgccggagaa
ctggataaaccggttgaagatgtcagcaggatgctgaaacttaacgaacgtataacgtct
gttgataccccgttagggggagagtcggataaggcgctgctggatattttgtctgacgat
aatgacagcggtcctgaagatcgtacccagaacaatgatatgaaacagagcattgttaaa
tggctgtacgagctgaatccaaaacagcgtgaagttctggcccgccgctttgggctgctg
ggctatgaagccgcgactctggaagatgtcgggcaggaaatttctctgacccgtgaacgt
gtccgccagattcaggtggaaggtttacgtcggttacgggaaatcttacagggacagggt
cttagcattgaagcgttgtttcgcgagtaa
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